Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   KIP81_RS02925 Genome accession   NZ_CP075172
Coordinates   553613..554263 (-) Length   216 a.a.
NCBI ID   WP_243603138.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 548613..559263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS02905 (KIP81_02910) trpB 549163..550365 (+) 1203 WP_033152175.1 tryptophan synthase subunit beta -
  KIP81_RS02910 (KIP81_02915) trpA 550369..551151 (+) 783 WP_243603136.1 tryptophan synthase subunit alpha -
  KIP81_RS02915 (KIP81_02920) - 551187..552527 (-) 1341 WP_243603137.1 Nramp family divalent metal transporter -
  KIP81_RS02920 (KIP81_02925) - 552757..553383 (+) 627 WP_039697294.1 class I SAM-dependent methyltransferase -
  KIP81_RS02925 (KIP81_02930) cclA/cilC 553613..554263 (-) 651 WP_243603138.1 A24 family peptidase Machinery gene
  KIP81_RS02930 (KIP81_02935) - 554405..554929 (+) 525 WP_021141848.1 Dps family protein -
  KIP81_RS02935 (KIP81_02940) - 555056..555265 (+) 210 WP_024344227.1 YqgQ family protein -
  KIP81_RS02940 (KIP81_02945) - 555258..556226 (+) 969 WP_243603139.1 ROK family glucokinase -
  KIP81_RS02945 (KIP81_02950) - 556238..556618 (+) 381 WP_004230712.1 rhodanese-like domain-containing protein -
  KIP81_RS02950 (KIP81_02955) typA 556804..558648 (+) 1845 WP_004230714.1 translational GTPase TypA -
  KIP81_RS02955 (KIP81_02960) - 558788..559060 (+) 273 WP_243603140.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 24681.87 Da        Isoelectric Point: 7.7431

>NTDB_id=497386 KIP81_RS02925 WP_243603138.1 553613..554263(-) (cclA/cilC) [Streptococcus equinus strain SheepZ001]
MDILLIFFLGASLASFIGLVIDRFPNESILFPASHCETCGKKLEVRDLIPVFSQIINRSRCRFCHTKLPIWYGIFEFICG
ILTAICYQGMLPLSTLFIIFLSLTLSIYDLKYQSFPLLIWLLPSCCLLPVTPIKTLTIILLLFGIIAELIDVKLGSGDCF
YLATLSLFLDLQNILWIVEIGSFTGIIFCLLHKNKRIPFVPFLFFGYIFVSFFKYT

Nucleotide


Download         Length: 651 bp        

>NTDB_id=497386 KIP81_RS02925 WP_243603138.1 553613..554263(-) (cclA/cilC) [Streptococcus equinus strain SheepZ001]
ATGGACATTTTATTAATCTTTTTTCTCGGAGCATCCCTTGCTTCTTTCATCGGCTTAGTAATTGACCGTTTTCCAAACGA
ATCCATTCTTTTTCCAGCTAGTCATTGTGAGACTTGTGGTAAGAAACTTGAGGTTCGTGACTTGATTCCTGTGTTTTCAC
AAATTATCAATCGGTCACGCTGTCGTTTTTGTCACACAAAACTCCCAATTTGGTATGGCATTTTTGAATTCATCTGCGGA
ATATTAACTGCCATCTGCTATCAAGGAATGCTACCACTCTCGACACTCTTTATTATCTTTTTAAGTCTCACGCTCAGTAT
CTACGATTTAAAATACCAATCATTTCCTTTACTAATATGGTTGCTCCCGAGTTGCTGTTTACTCCCAGTTACACCAATCA
AAACTCTCACTATTATCCTTTTGTTGTTTGGAATCATTGCAGAGCTGATTGATGTGAAACTTGGTAGTGGAGATTGTTTT
TATCTAGCAACTTTGAGCCTTTTTTTAGACTTACAAAACATTTTATGGATTGTAGAAATAGGGTCATTTACAGGAATTAT
TTTTTGTCTTTTACACAAAAATAAACGAATTCCTTTTGTACCTTTTCTCTTTTTCGGATACATTTTTGTATCGTTTTTTA
AGTACACTTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

42.105

96.759

0.407
  cclA/cilC Streptococcus pneumoniae TIGR4

41.627

96.759

0.403
  cclA/cilC Streptococcus mitis SK321

41.148

96.759

0.398
  cclA/cilC Streptococcus pneumoniae Rx1

41.148

96.759

0.398
  cclA/cilC Streptococcus pneumoniae D39

41.148

96.759

0.398
  cclA/cilC Streptococcus pneumoniae R6

41.148

96.759

0.398