Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SPYALAB49_RS07135 Genome accession   NC_017596
Coordinates   1404840..1405565 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes Alab49     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399840..1410565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYALAB49_RS07100 (SPYALAB49_001457) rimP 1400193..1400729 (-) 537 WP_014635653.1 ribosome maturation factor RimP -
  SPYALAB49_RS07110 (SPYALAB49_001458) - 1400917..1402050 (-) 1134 WP_000564846.1 ISAs1-like element IS1548 family transposase -
  SPYALAB49_RS07120 (SPYALAB49_001460) trmB 1402313..1402948 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYALAB49_RS07125 (SPYALAB49_001461) ccrZ 1402948..1403739 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPYALAB49_RS07130 (SPYALAB49_001462) - 1403803..1404837 (-) 1035 WP_002994331.1 ABC transporter permease -
  SPYALAB49_RS07135 (SPYALAB49_001463) pptA 1404840..1405565 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYALAB49_RS07140 (SPYALAB49_001464) - 1405637..1406056 (+) 420 WP_002983376.1 HIT family protein -
  SPYALAB49_RS07145 (SPYALAB49_001465) - 1406053..1406409 (+) 357 WP_002988657.1 hypothetical protein -
  SPYALAB49_RS07150 (SPYALAB49_001466) - 1406520..1407803 (-) 1284 WP_002994335.1 LCP family protein -
  SPYALAB49_RS07155 (SPYALAB49_001467) - 1407812..1408336 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  SPYALAB49_RS07160 (SPYALAB49_001468) tsaE 1408311..1408772 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYALAB49_RS07165 (SPYALAB49_001469) - 1408926..1410386 (-) 1461 WP_014635654.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=49549 SPYALAB49_RS07135 WP_002983379.1 1404840..1405565(-) (pptA) [Streptococcus pyogenes Alab49]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=49549 SPYALAB49_RS07135 WP_002983379.1 1404840..1405565(-) (pptA) [Streptococcus pyogenes Alab49]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment