Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SSAL_RS05485 Genome accession   NC_017594
Coordinates   1208569..1209381 (-) Length   270 a.a.
NCBI ID   WP_013990680.1    Uniprot ID   A0AAX1YAX4
Organism   Streptococcus salivarius 57.I     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203569..1214381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS05455 (Ssal_01213) - 1203790..1204656 (-) 867 WP_004182606.1 GNAT family N-acetyltransferase -
  SSAL_RS05460 (Ssal_01215) yidA 1204835..1205641 (+) 807 WP_004182607.1 sugar-phosphatase -
  SSAL_RS05465 (Ssal_01216) - 1205641..1206855 (+) 1215 WP_014633201.1 aminoacyltransferase -
  SSAL_RS05470 (Ssal_01217) tnpA 1206994..1207467 (-) 474 WP_002891962.1 IS200/IS605 family transposase -
  SSAL_RS05475 - 1207703..1207979 (-) 277 Protein_1071 ISL3 family transposase -
  SSAL_RS05480 (Ssal_01218) - 1208151..1208510 (-) 360 WP_014633202.1 YbaN family protein -
  SSAL_RS05485 (Ssal_01219) vicX 1208569..1209381 (-) 813 WP_013990680.1 MBL fold metallo-hydrolase Regulator
  SSAL_RS05490 (Ssal_01220) vicK 1209387..1210727 (-) 1341 WP_014633203.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SSAL_RS05495 (Ssal_01221) vicR 1210720..1211427 (-) 708 WP_014633204.1 response regulator YycF Regulator
  SSAL_RS05500 (Ssal_01222) - 1211713..1212480 (+) 768 WP_014633205.1 amino acid ABC transporter ATP-binding protein -
  SSAL_RS05505 (Ssal_01223) - 1212490..1213323 (+) 834 WP_014633206.1 transporter substrate-binding domain-containing protein -
  SSAL_RS05510 (Ssal_01224) - 1213341..1214039 (+) 699 WP_014633207.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=49403 SSAL_RS05485 WP_013990680.1 1208569..1209381(-) (vicX) [Streptococcus salivarius 57.I]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=49403 SSAL_RS05485 WP_013990680.1 1208569..1209381(-) (vicX) [Streptococcus salivarius 57.I]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCTATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGTATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGACGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTCATGTTGACGGATACGGGTTACGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACAGACTTCAAGGTTTATGATACCTCACCAGATACAGCGACTCCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767

Multiple sequence alignment