Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | SPNINV200_RS00130 | Genome accession | NC_017593 |
| Coordinates | 22341..22577 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae INV200 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17341..27577
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPNINV200_RS11160 (SPNINV200_00160) | - | 20410..21257 (+) | 848 | WP_128973861.1 | IS630 family transposase | - |
| SPNINV200_RS11165 (SPNINV200_00170) | - | 21292..22076 (-) | 785 | Protein_15 | transposase | - |
| SPNINV200_RS00130 (SPNINV200_00180) | comW | 22341..22577 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| SPNINV200_RS00135 (SPNINV200_00190) | - | 22808..24094 (+) | 1287 | WP_001832534.1 | adenylosuccinate synthase | - |
| SPNINV200_RS00140 (SPNINV200_00200) | tadA | 24295..24762 (+) | 468 | WP_000291872.1 | tRNA adenosine(34) deaminase TadA | - |
| SPNINV200_RS00145 (SPNINV200_00210) | - | 24948..25391 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| SPNINV200_RS00150 (SPNINV200_00220) | - | 25393..25908 (+) | 516 | WP_001828232.1 | histidine phosphatase family protein | - |
| SPNINV200_RS00155 (SPNINV200_00230) | radA | 25922..27283 (+) | 1362 | WP_073176637.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=49294 SPNINV200_RS00130 WP_000939545.1 22341..22577(+) (comW) [Streptococcus pneumoniae INV200]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=49294 SPNINV200_RS00130 WP_000939545.1 22341..22577(+) (comW) [Streptococcus pneumoniae INV200]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |