Detailed information NTG0492858

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: A0071_RS03160
• Genome accession: NZ_CP063091
• Coordinates: 641829..643016 (-)
• Length: 395 a.a.
• NCBI ID: WP_027304963.1
• Uniprot ID: A0A1W6BUF9
• Organism: Campylobacter cuniculorum strain 2010D-8469
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 636829..648016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0071_RS03140 (A0071_03140)	-	636838..637035 (-)	198	WP_027304959.1	hypothetical protein	-
A0071_RS03145 (A0071_03145)	-	637488..638048 (-)	561	WP_027304960.1	Fe-S-containing hydro-lyase	-
A0071_RS03150 (A0071_03150)	-	638133..638978 (-)	846	WP_027304961.1	fumarate hydratase	-
A0071_RS09845	-	639283..640497 (-)	1215	WP_415270574.1	methyl-accepting chemotaxis protein	-
A0071_RS09850	-	640537..641217 (-)	681	Protein_624	cache domain-containing protein	-
A0071_RS03160 (A0071_03160)	ctsF	641829..643016 (-)	1188	WP_027304963.1	type II secretion system F family protein	Machinery gene
A0071_RS03165 (A0071_03165)	ctsE	643013..644623 (-)	1611	WP_035175584.1	GspE/PulE family protein	Machinery gene
A0071_RS03170 (A0071_03170)	-	644620..645210 (-)	591	WP_027304965.1	CDC27 family protein	-
A0071_RS03175 (A0071_03175)	ctsP	645213..645827 (-)	615	WP_027304966.1	ATP-binding protein	Machinery gene
A0071_RS03180 (A0071_03180)	ctsD	645820..647235 (-)	1416	WP_027304967.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
A0071_RS03185 (A0071_03185)	-	647213..647548 (-)	336	WP_051521659.1	hypothetical protein	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 45207.04 Da
• Isoelectric Point: 10.0192

>NTDB_id=492858 A0071_RS03160 WP_027304963.1 641829..643016(-) (ctsF) [Campylobacter cuniculorum strain 2010D-8469]
MKIYELEFIQKGLKAKKLIKASNLNVAQNLALKENLQILSLKEVKKPFFKTKISGQNFILFFKELSLLSGVGLSIKEALK
ELSKNHKNFDKIIAQINENLNLGQNLSKAFETPYLALNSGELALIKMAENTGKLSKIFMQIAELREKSLQNQKRVKKAIR
YPLIVFLSVCGAFLFLMFFVVGEFENLFENLGVDLPLMTRILLGIYEFLNKYYLFLAVFFLCVLLNLFFLYKKSNHFASI
CDFLVFKTPLLSHFMLCNQNYYFFIIFSLLLKSGIPTSKAFKIAYSSIKNRALFSKFKDIENSLSQGIDLSVAFEKVKIF
DSVVISMLNVAMKSAKLELLSNEIANFYERKQEDFMDKFLALLEPLMTLVVGILVLFLALGIFLPLWELGSGVKF

Nucleotide

• Length: 1188 bp

>NTDB_id=492858 A0071_RS03160 WP_027304963.1 641829..643016(-) (ctsF) [Campylobacter cuniculorum strain 2010D-8469]
TTGAAAATTTATGAACTTGAATTCATACAAAAAGGACTTAAAGCCAAAAAGCTTATTAAGGCTTCGAATTTAAATGTCGC
ACAAAATTTAGCCCTAAAAGAAAATCTTCAAATTTTAAGCCTTAAAGAAGTCAAAAAACCTTTTTTTAAAACTAAAATTT
CAGGTCAAAATTTTATTTTATTTTTTAAAGAGCTTAGTCTGCTTAGCGGAGTGGGTTTGAGTATCAAAGAAGCCTTAAAA
GAATTGTCAAAAAATCACAAAAATTTTGATAAAATCATAGCTCAAATCAATGAAAATTTAAATCTCGGACAAAATTTAAG
CAAAGCCTTTGAAACTCCCTATCTCGCTCTCAATTCAGGCGAACTTGCCCTCATTAAAATGGCCGAAAATACAGGAAAAC
TTAGCAAAATTTTTATGCAAATTGCTGAGCTTAGAGAAAAAAGTCTGCAAAATCAAAAACGAGTCAAAAAGGCTATAAGA
TACCCTTTGATAGTGTTTTTAAGCGTTTGTGGAGCATTTTTATTTTTAATGTTTTTTGTTGTTGGTGAATTTGAAAATTT
ATTTGAAAATTTGGGGGTTGATTTGCCTTTGATGACGCGAATTTTACTAGGAATTTATGAATTTTTAAACAAATACTATC
TTTTTTTAGCAGTATTTTTTCTCTGTGTTTTGCTCAATTTGTTTTTTCTTTATAAAAAATCAAATCATTTTGCTTCTATC
TGCGATTTTTTGGTGTTTAAAACGCCTTTATTGTCTCATTTTATGCTTTGCAATCAAAATTATTATTTCTTTATCATTTT
TTCTTTGCTTTTAAAAAGCGGAATTCCAACTTCTAAGGCTTTCAAAATTGCATACAGCAGTATTAAAAACAGGGCTTTGT
TTTCAAAATTTAAAGATATTGAAAATTCTTTGTCGCAAGGAATTGATTTGAGTGTGGCTTTCGAAAAGGTAAAAATTTTT
GATTCTGTGGTGATTTCTATGCTCAATGTTGCAATGAAAAGTGCAAAATTAGAGCTTTTAAGCAATGAAATTGCAAATTT
TTATGAGAGAAAACAAGAGGATTTTATGGATAAATTTTTAGCCCTGCTTGAACCTTTAATGACCTTAGTGGTTGGAATTT
TGGTTTTATTTTTGGCTTTGGGAATTTTTTTGCCTTTGTGGGAGCTTGGTTCTGGTGTGAAATTTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (266-385)

• Type II secretion system (T2SS), protein F (T2SSF) (61-181)

3D structure

• AlphaFold DB: A0A1W6BUF9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	54.177	100	0.542