Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   IMO23_RS00780 Genome accession   NZ_CP062919
Coordinates   160589..161725 (-) Length   378 a.a.
NCBI ID   WP_195707692.1    Uniprot ID   A0A7S8WEE2
Organism   Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 155589..166725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMO23_RS00745 (IMO23_00745) atpD 155636..157030 (+) 1395 WP_000094481.1 F0F1 ATP synthase subunit beta -
  IMO23_RS00750 (IMO23_00750) - 157048..157467 (+) 420 WP_000224542.1 F0F1 ATP synthase subunit epsilon -
  IMO23_RS00755 (IMO23_00755) - 157529..158128 (-) 600 WP_195707691.1 hypothetical protein -
  IMO23_RS00760 (IMO23_00760) - 158274..158405 (-) 132 Protein_146 glutathione peroxidase -
  IMO23_RS00765 (IMO23_00765) - 158399..158557 (+) 159 Protein_147 TetR/AcrR family transcriptional regulator -
  IMO23_RS00770 (IMO23_00770) - 158663..159583 (+) 921 WP_001994180.1 DMT family transporter -
  IMO23_RS00775 (IMO23_00775) - 159975..160544 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  IMO23_RS00780 (IMO23_00780) dprA 160589..161725 (-) 1137 WP_195707692.1 DNA-processing protein DprA Machinery gene
  IMO23_RS00785 (IMO23_00785) tsaP 161746..162900 (-) 1155 WP_000755273.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  IMO23_RS00790 (IMO23_00790) def 163023..163553 (+) 531 WP_001196539.1 peptide deformylase -
  IMO23_RS00795 (IMO23_00795) - 163590..164018 (+) 429 WP_000231981.1 DUF2946 family protein -
  IMO23_RS00800 (IMO23_00800) - 164091..166205 (+) 2115 WP_109429011.1 TonB-dependent copper receptor -
  IMO23_RS00805 (IMO23_00805) - 166259..166465 (+) 207 WP_000182542.1 hypothetical protein -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 42160.78 Da        Isoelectric Point: 6.4547

>NTDB_id=491953 IMO23_RS00780 WP_195707692.1 160589..161725(-) (dprA) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKVTQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRSLY

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=491953 IMO23_RS00780 WP_195707692.1 160589..161725(-) (dprA) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGTCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGCGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATTCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAGGCTAATACGAATACTCCAGAAATTCCT
GAGCATCTGATTGACCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTTGTATTAG

Domains

Predicted by InterproScan.

DprA winged helix domain (DprA_WH)

(328-369)

DNA recombination-mediator protein A (DNA_processg_A)

(87-285)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S8WEE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

97.872

99.471

0.974
  dprA Acinetobacter baumannii strain A118

97.606

99.471

0.971
  dprA Acinetobacter baylyi ADP1

70.235

100

0.712
  dprA Vibrio cholerae strain A1552

43.202

87.566

0.378