Detailed information NTG0491108

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KGS77_RS24020
• Genome accession: NZ_CP074380
• Coordinates: 5505783..5507075 (+)
• Length: 430 a.a.
• NCBI ID: WP_242585053.1
• Uniprot ID: -
• Organism: Streptomyces sp. MST-110588
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5500783..5512075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KGS77_RS23990 (KGS77_23830)	-	5501188..5501382 (+)	195	WP_242585051.1	hypothetical protein	-
KGS77_RS24005 (KGS77_23845)	tig	5502570..5503976 (+)	1407	WP_242585052.1	trigger factor	-
KGS77_RS24010 (KGS77_23850)	clpP	5504271..5504876 (+)	606	WP_242587651.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KGS77_RS24015 (KGS77_23855)	clpP	5504944..5505597 (+)	654	WP_242587652.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KGS77_RS24020 (KGS77_23860)	clpX	5505783..5507075 (+)	1293	WP_242585053.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KGS77_RS24025 (KGS77_23865)	-	5507240..5507926 (-)	687	WP_242585054.1	hypothetical protein	-
KGS77_RS24030 (KGS77_23870)	-	5508226..5508888 (-)	663	WP_347404525.1	hypothetical protein	-
KGS77_RS24035 (KGS77_23875)	-	5509249..5511885 (+)	2637	WP_242585055.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 46964.75 Da
• Isoelectric Point: 4.9451

>NTDB_id=491108 KGS77_RS24020 WP_242585053.1 5505783..5507075(+) (clpX) [Streptomyces sp. MST-110588]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGRGGDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGED
VENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEARSGAKGIGFGATIRSKREIESKDRLQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLVPRTTRGGEPGEHHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=491108 KGS77_RS24020 WP_242585053.1 5505783..5507075(+) (clpX) [Streptomyces sp. MST-110588]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGTCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCT
CCGAGGTCCGCTGGGAAGAACTGCCCAAGCCCCGGGAGATCTACGAGTTCCTGGAGAGCTACGTCGTGGGCCAGGAGCCC
GCCAAGAAGGCTCTCTCGGTGGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCGGCGGGCGCGGCGG
CGACGACGGGATCGAGCTGGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTCGCCCGGATGCTCAACGTCCCCTTCGCCTTCGCCGACGCCACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTGGAGAACATCCTCCTGAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACCGCCTCGGTCCCCCCGCAGGGCGGACGCAAGCACCCCCACCAGGAATTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTCGGCGGCGCCTTCGCCGGTCTGGAGAAGATCATCGAGGCCCGGTCCGGCGC
GAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCCAAGGACCGGCTCCAGGAAGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCCGTGCACAACCTCGACCGG
GAAGCGCTCCTGCAGATCCTGCTGGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGGCTGTTCGAACTGGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCGGTACGGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGGGTCGTGATCACC
GCGGACGTGGTGCACTCCAACGTCAACCCGACGCTGGTCCCGCGGACGACGCGCGGCGGCGAGCCGGGCGAACACCACGA
GAAGAGCGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.488	0.588
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.528	95.581	0.512