Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF702_RS13375 | Genome accession | NZ_CP062384 |
| Coordinates | 2718882..2719352 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain NAS_AN_050 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2713882..2724352
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF702_RS13335 (IF702_13285) | - | 2713894..2714217 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| IF702_RS13340 (IF702_13290) | - | 2714214..2714375 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| IF702_RS13345 (IF702_13295) | - | 2714470..2714772 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| IF702_RS13350 (IF702_13300) | - | 2714777..2715037 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| IF702_RS13355 (IF702_13305) | - | 2715046..2715309 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF702_RS13360 (IF702_13310) | - | 2715318..2717261 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| IF702_RS13365 (IF702_13315) | - | 2717263..2718183 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF702_RS13370 (IF702_13320) | - | 2718264..2718881 (+) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| IF702_RS13375 (IF702_13325) | ssbA | 2718882..2719352 (+) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| IF702_RS13380 (IF702_13330) | - | 2719382..2720275 (+) | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| IF702_RS13385 (IF702_13335) | - | 2720282..2720500 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| IF702_RS13390 (IF702_13340) | - | 2720509..2720913 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF702_RS13395 (IF702_13345) | - | 2720926..2721294 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF702_RS13400 (IF702_13350) | - | 2721298..2721540 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| IF702_RS13405 (IF702_13355) | - | 2721555..2721809 (+) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| IF702_RS13410 (IF702_13360) | - | 2721796..2721966 (+) | 171 | WP_000714403.1 | hypothetical protein | - |
| IF702_RS13415 (IF702_13365) | - | 2721959..2722495 (+) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| IF702_RS13420 (IF702_13370) | - | 2722532..2722777 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| IF702_RS13425 (IF702_13375) | - | 2722774..2722980 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF702_RS13430 (IF702_13380) | - | 2722977..2723363 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| IF702_RS13435 (IF702_13385) | - | 2723360..2723509 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IF702_RS13440 (IF702_13390) | - | 2723509..2723709 (+) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| IF702_RS13445 (IF702_13395) | - | 2723737..2724153 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=488926 IF702_RS13375 WP_000610648.1 2718882..2719352(+) (ssbA) [Staphylococcus aureus strain NAS_AN_050]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=488926 IF702_RS13375 WP_000610648.1 2718882..2719352(+) (ssbA) [Staphylococcus aureus strain NAS_AN_050]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |