Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | K751_RS02590 | Genome accession | NC_021218 |
| Coordinates | 531741..532751 (-) | Length | 336 a.a. |
| NCBI ID | WP_015643029.1 | Uniprot ID | - |
| Organism | Helicobacter pylori UM066 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 526741..537751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K751_RS02545 (K751_05555) | - | 526827..527201 (-) | 375 | WP_000772153.1 | chemotaxis response regulator CheY | - |
| K751_RS02550 (K751_05550) | - | 527492..528094 (+) | 603 | WP_015643035.1 | outer membrane protein | - |
| K751_RS02560 (K751_05545) | - | 528226..528633 (-) | 408 | WP_001919361.1 | hypothetical protein | - |
| K751_RS02565 (K751_05540) | - | 528636..528878 (-) | 243 | WP_015643034.1 | PP0621 family protein | - |
| K751_RS02570 (K751_05535) | rsmG | 528872..529408 (-) | 537 | WP_015643033.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| K751_RS02575 (K751_05530) | queA | 529405..530442 (-) | 1038 | WP_015643032.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| K751_RS02580 (K751_05525) | tatC | 530443..531204 (-) | 762 | WP_015643031.1 | twin-arginine translocase subunit TatC | - |
| K751_RS02585 (K751_05520) | tatB | 531197..531673 (-) | 477 | WP_015643030.1 | Sec-independent protein translocase protein TatB | - |
| K751_RS02590 (K751_05515) | ruvB | 531741..532751 (-) | 1011 | WP_015643029.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| K751_RS02595 (K751_05510) | panB | 532752..533564 (-) | 813 | WP_015643028.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| K751_RS02600 (K751_05505) | - | 533714..534436 (+) | 723 | WP_015643027.1 | hypothetical protein | - |
| K751_RS02605 (K751_05500) | - | 534426..535280 (+) | 855 | WP_015643026.1 | outer membrane beta-barrel protein | - |
| K751_RS02610 (K751_05495) | - | 535289..536233 (+) | 945 | WP_021299604.1 | outer membrane beta-barrel protein | - |
| K751_RS02615 (K751_05490) | - | 536243..537565 (+) | 1323 | WP_015643024.1 | M23 family metallopeptidase | - |
Sequence
Protein
Download Length: 336 a.a. Molecular weight: 37307.27 Da Isoelectric Point: 6.0715
>NTDB_id=48828 K751_RS02590 WP_015643029.1 531741..532751(-) (ruvB) [Helicobacter pylori UM066]
MKERIVNLETLDFETSQEVSLRPNLWEDYIGQEKIKSNLQISICAAKKRQESLDHMLFFGPPGLGKTSISHIIAKEMETN
IKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATT
RAGMLSNPLRDRFGMSFRMQFYSPSELALIIKKAAAKLNQNIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALDELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPK
THALLKIPTLNPQTLF
MKERIVNLETLDFETSQEVSLRPNLWEDYIGQEKIKSNLQISICAAKKRQESLDHMLFFGPPGLGKTSISHIIAKEMETN
IKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATT
RAGMLSNPLRDRFGMSFRMQFYSPSELALIIKKAAAKLNQNIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALDELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPK
THALLKIPTLNPQTLF
Nucleotide
Download Length: 1011 bp
>NTDB_id=48828 K751_RS02590 WP_015643029.1 531741..532751(-) (ruvB) [Helicobacter pylori UM066]
ATGAAAGAACGGATAGTCAATTTAGAAACTTTGGATTTTGAAACTTCTCAAGAAGTGAGTTTGCGCCCTAATCTTTGGGA
AGATTATATCGGTCAAGAAAAGATTAAAAGCAATTTGCAAATTTCTATTTGCGCGGCTAAAAAACGCCAAGAAAGTTTGG
ATCACATGCTCTTTTTTGGCCCACCTGGTTTGGGTAAAACTTCAATAAGCCATATCATCGCTAAAGAAATGGAAACCAAT
ATCAAAATCACCGCCGCTCCCATGATAGAAAAAAGCGGTGATTTAGCCGCCATTTTGACGAATTTGCAAGCTAAAGACAT
TCTTTTTATTGATGAAATCCACCGGCTTAGCCCAGCGATTGAAGAGGTTTTATACCCGGCTATGGAAGATTTCAGGCTAG
ATATTATCATAGGCTCAGGCCCAGCGGCTCAAACCATTAAAATTGATTTGCCCCCTTTCACCCTCATCGGCGCTACCACC
AGAGCCGGAATGCTCTCTAACCCCTTAAGAGACAGATTTGGCATGAGCTTTAGAATGCAATTTTATAGCCCTAGCGAACT
AGCCCTCATCATCAAAAAAGCCGCCGCTAAACTCAACCAAAACATCAAAGAAGAAAGCGCTGATGAAATCGCTAAAAGGA
GTAGAGGCACGCCAAGGATCGCTTTAAGGCTTTTAAAAAGGGTGCGCGATTTTGCGTTAGTCAAAAATTCAAGCTTGATG
GATTTAAACATCACTTTGCATGCTTTGGATGAGTTAGGCGTGAATGAATTAGGCTTTGATGAAGCGGATCTGGCGTATTT
GTCTTTGTTGGCTAACGCTCAAGGACGACCGGTGGGTTTGAACACGATTGCAGCATCTATGAGAGAAGATGAAGGCACGA
TTGAAGATGTGATTGAGCCTTTTTTGCTCGCTAATGGTTATTTAGAGCGCACCGCTAAAGGCAGAATCGCCACGCCCAAA
ACCCATGCGCTTTTAAAAATCCCCACTTTAAACCCTCAAACTTTATTTTAA
ATGAAAGAACGGATAGTCAATTTAGAAACTTTGGATTTTGAAACTTCTCAAGAAGTGAGTTTGCGCCCTAATCTTTGGGA
AGATTATATCGGTCAAGAAAAGATTAAAAGCAATTTGCAAATTTCTATTTGCGCGGCTAAAAAACGCCAAGAAAGTTTGG
ATCACATGCTCTTTTTTGGCCCACCTGGTTTGGGTAAAACTTCAATAAGCCATATCATCGCTAAAGAAATGGAAACCAAT
ATCAAAATCACCGCCGCTCCCATGATAGAAAAAAGCGGTGATTTAGCCGCCATTTTGACGAATTTGCAAGCTAAAGACAT
TCTTTTTATTGATGAAATCCACCGGCTTAGCCCAGCGATTGAAGAGGTTTTATACCCGGCTATGGAAGATTTCAGGCTAG
ATATTATCATAGGCTCAGGCCCAGCGGCTCAAACCATTAAAATTGATTTGCCCCCTTTCACCCTCATCGGCGCTACCACC
AGAGCCGGAATGCTCTCTAACCCCTTAAGAGACAGATTTGGCATGAGCTTTAGAATGCAATTTTATAGCCCTAGCGAACT
AGCCCTCATCATCAAAAAAGCCGCCGCTAAACTCAACCAAAACATCAAAGAAGAAAGCGCTGATGAAATCGCTAAAAGGA
GTAGAGGCACGCCAAGGATCGCTTTAAGGCTTTTAAAAAGGGTGCGCGATTTTGCGTTAGTCAAAAATTCAAGCTTGATG
GATTTAAACATCACTTTGCATGCTTTGGATGAGTTAGGCGTGAATGAATTAGGCTTTGATGAAGCGGATCTGGCGTATTT
GTCTTTGTTGGCTAACGCTCAAGGACGACCGGTGGGTTTGAACACGATTGCAGCATCTATGAGAGAAGATGAAGGCACGA
TTGAAGATGTGATTGAGCCTTTTTTGCTCGCTAATGGTTATTTAGAGCGCACCGCTAAAGGCAGAATCGCCACGCCCAAA
ACCCATGCGCTTTTAAAAATCCCCACTTTAAACCCTCAAACTTTATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Helicobacter pylori 26695 |
97.024 |
100 |
0.97 |
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
53.87 |
96.131 |
0.518 |
| ruvB | Streptococcus pneumoniae TIGR4 |
50.774 |
96.131 |
0.488 |
| ruvB | Streptococcus pneumoniae R6 |
50.774 |
96.131 |
0.488 |
| ruvB | Streptococcus pneumoniae D39 |
50.774 |
96.131 |
0.488 |
| ruvB | Synechocystis sp. PCC 6803 |
51.42 |
94.345 |
0.485 |