Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | STND_RS01865 | Genome accession | NC_017563 |
| Coordinates | 339408..339998 (+) | Length | 196 a.a. |
| NCBI ID | WP_002949732.1 | Uniprot ID | Q5M5U4 |
| Organism | Streptococcus thermophilus ND03 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 334408..344998
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STND_RS01840 (STND_0343) | - | 334788..335381 (+) | 594 | Protein_316 | cation transporting ATPase C-terminal domain-containing protein | - |
| STND_RS01845 (STND_0344) | - | 335685..336779 (+) | 1095 | WP_002946733.1 | cystathionine gamma-synthase | - |
| STND_RS01850 (STND_0345) | - | 336790..337953 (+) | 1164 | WP_011680761.1 | MalY/PatB family protein | - |
| STND_RS01855 (STND_0346) | - | 338029..338196 (+) | 168 | WP_014607986.1 | hypothetical protein | - |
| STND_RS11875 (STND_0347) | - | 338237..338371 (+) | 135 | WP_014607987.1 | hypothetical protein | - |
| STND_RS01860 (STND_0348) | upp | 338641..339270 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| STND_RS01865 (STND_0349) | clpP | 339408..339998 (+) | 591 | WP_002949732.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| STND_RS01870 (STND_0350) | - | 340085..340534 (+) | 450 | WP_011225507.1 | YlbF family regulator | - |
| STND_RS01875 (STND_0351) | - | 340527..340808 (+) | 282 | WP_002949736.1 | YlbG family protein | - |
| STND_RS01880 (STND_0352) | - | 340965..342140 (+) | 1176 | WP_014607988.1 | ABC transporter substrate-binding protein | - |
| STND_RS01885 (STND_0353) | - | 342184..343068 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| STND_RS01890 (STND_0354) | - | 343072..344022 (+) | 951 | WP_011225510.1 | branched-chain amino acid ABC transporter permease | - |
| STND_RS01895 (STND_0355) | - | 344025..344789 (+) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21577.62 Da Isoelectric Point: 4.4829
>NTDB_id=48693 STND_RS01865 WP_002949732.1 339408..339998(+) (clpP) [Streptococcus thermophilus ND03]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=48693 STND_RS01865 WP_002949732.1 339408..339998(+) (clpP) [Streptococcus thermophilus ND03]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
100 |
100 |
1 |
| clpP | Streptococcus thermophilus LMD-9 |
100 |
100 |
1 |
| clpP | Streptococcus pneumoniae D39 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae R6 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |