Detailed information NTG0048484

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: I872_RS00295
• Genome accession: NC_021175
• Coordinates: 48325..49323 (+)
• Length: 332 a.a.
• NCBI ID: WP_015604199.1
• Uniprot ID: A0ABM5NHJ7
• Organism: Streptococcus cristatus AS 1.3089
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 43325..54323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I872_RS00270 (I872_00200)	-	43765..44583 (+)	819	WP_015604194.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
I872_RS00275 (I872_00205)	-	44595..44999 (+)	405	WP_015604195.1	PTS sugar transporter subunit IIA	-
I872_RS00280 (I872_00210)	-	45107..46270 (+)	1164	WP_015604196.1	SIS domain-containing protein	-
I872_RS00285 (I872_00215)	-	46578..47615 (+)	1038	WP_015604197.1	aldose epimerase family protein	-
I872_RS00290 (I872_00220)	-	47715..47978 (-)	264	WP_015604198.1	YiaA/YiaB family inner membrane protein	-
I872_RS00295 (I872_00225)	ruvB	48325..49323 (+)	999	WP_015604199.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I872_RS00300	-	49320..49894 (+)	575	Protein_46	nucleotidyltransferase family protein	-
I872_RS00305 (I872_00240)	-	50069..50491 (+)	423	WP_015604200.1	low molecular weight protein-tyrosine-phosphatase	-
I872_RS00310 (I872_00245)	-	50495..50908 (+)	414	WP_015604201.1	MORN repeat-containing protein	-
I872_RS00315 (I872_00250)	-	50898..52712 (+)	1815	WP_015604202.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37424.86 Da
• Isoelectric Point: 4.4857

>NTDB_id=48484 I872_RS00295 WP_015604199.1 48325..49323(+) (ruvB) [Streptococcus cristatus AS 1.3089]
MSRILDNELMGDEELVERTLRPQYLREYIGQDKVKDQLKIFIEAAKLRDEALDHALLFGPPGLGKTTMAFVIANELGVNI
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGTGETSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYEASDLTEIVERTAEIFEMDITHEAARELALRSRGTPRIANRLLKRVRDYAQIMGDGLVD
AQITDKALSMLDVDREGLDYVDQKILRTMIEVYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFVMRTRTGRVATRK
AYEHLGYEYMEE

Nucleotide

• Length: 999 bp

>NTDB_id=48484 I872_RS00295 WP_015604199.1 48325..49323(+) (ruvB) [Streptococcus cristatus AS 1.3089]
ATGAGTAGAATTTTAGATAATGAATTAATGGGGGATGAGGAGCTGGTAGAACGTACCCTCCGTCCTCAGTATTTACGAGA
ATATATCGGTCAGGATAAGGTTAAGGATCAGCTGAAGATTTTTATCGAAGCGGCTAAATTGCGGGATGAGGCCTTGGATC
ATGCCTTGCTTTTTGGCCCTCCGGGTCTAGGAAAGACGACCATGGCCTTTGTCATTGCCAACGAACTCGGTGTGAATATC
AAGCAGACTTCTGGCCCAGTCATTGAAAAGGCTGGTGATTTGGTGGCCATTCTCAATGATTTGGAGCCAGGTGACGTTCT
TTTTATCGATGAGATCCACCGTTTGCCTATGGCAGTGGAGGAAGTGCTCTACAGCGCCATGGAGGACTTTTACATTGACA
TTATGATTGGGACTGGCGAGACCAGTCGCAGCGTCCATCTGGAATTGCCACCTTTCACGCTAATTGGGGCGACCACTCGG
GCGGGCATGCTGTCTAATCCTCTGCGGGCTCGTTTTGGGATTACTGGTCATATGGAGTATTATGAAGCCAGCGACCTGAC
CGAAATCGTCGAGCGGACGGCAGAGATTTTTGAGATGGATATTACCCACGAGGCTGCTCGAGAGCTGGCTCTGCGTAGCC
GGGGCACGCCGCGGATTGCCAATCGTCTGCTCAAGCGGGTGCGAGACTACGCCCAGATTATGGGGGATGGACTGGTCGAT
GCTCAGATCACAGACAAGGCCTTATCCATGCTGGACGTGGATCGAGAAGGGCTGGACTATGTAGATCAGAAAATCCTACG
AACCATGATTGAAGTTTATGGGGGTGGTCCAGTCGGGCTGGGGACACTTTCAGTCAATATTGCTGAGGAGCGCGAAACGG
TGGAAGACATGTATGAGCCTTACCTGATTCAGAAAGGCTTTGTTATGCGGACACGGACTGGGCGCGTGGCGACTCGTAAA
GCCTATGAGCATCTGGGATATGAGTATATGGAGGAATGA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	91.265	100	0.913
ruvB	Streptococcus pneumoniae R6	90.964	100	0.91
ruvB	Streptococcus pneumoniae D39	90.964	100	0.91
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.282	98.193	0.572
ruvB	Helicobacter pylori 26695	51.703	97.289	0.503
ruvB	Synechocystis sp. PCC 6803	50.16	94.277	0.473