Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   IC776_RS00845 Genome accession   NZ_CP061646
Coordinates   179501..180631 (-) Length   376 a.a.
NCBI ID   WP_191012455.1    Uniprot ID   A0A7H2NKZ4
Organism   Acinetobacter seifertii strain AS39     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 174501..185631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC776_RS00820 (IC776_00820) - 174675..175439 (-) 765 WP_086496015.1 AraC family transcriptional regulator -
  IC776_RS00825 (IC776_00825) - 175460..176674 (-) 1215 WP_039252932.1 MFS transporter -
  IC776_RS00830 (IC776_00830) - 176810..177463 (+) 654 WP_077164355.1 TetR/AcrR family transcriptional regulator -
  IC776_RS00835 (IC776_00835) - 177570..178490 (+) 921 WP_191012453.1 DMT family transporter -
  IC776_RS00840 (IC776_00840) - 178881..179450 (-) 570 WP_019458003.1 L-threonylcarbamoyladenylate synthase -
  IC776_RS00845 (IC776_00845) dprA 179501..180631 (-) 1131 WP_191012455.1 DNA-processing protein DprA Machinery gene
  IC776_RS00850 (IC776_00850) tsaP 180652..181806 (-) 1155 WP_191012457.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  IC776_RS00855 (IC776_00855) def 181929..182459 (+) 531 WP_004705924.1 peptide deformylase -
  IC776_RS00860 (IC776_00860) - 182495..182920 (+) 426 WP_004705923.1 DUF2946 family protein -
  IC776_RS00865 (IC776_00865) - 182994..185108 (+) 2115 WP_191012458.1 TonB-dependent copper receptor -
  IC776_RS00870 (IC776_00870) - 185161..185367 (+) 207 WP_039252952.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41888.50 Da        Isoelectric Point: 6.5374

>NTDB_id=483795 IC776_RS00845 WP_191012455.1 179501..180631(-) (dprA) [Acinetobacter seifertii strain AS39]
MLSQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGDCEKATQHDGLAKWQSLGLHANHLKRLNEFQTAQGQTEFERLIQQV
QQHTDFILTPDDVGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASVHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIISEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKIVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQNSTEEAIVSCTPEIP
EHLINLYQSLDWVGQNIDQLVLHHSQPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=483795 IC776_RS00845 WP_191012455.1 179501..180631(-) (dprA) [Acinetobacter seifertii strain AS39]
ATGCTTAGTCAACTTTCTTCACACCATTACCACACACTTAAAGTGTGGTATTTGGTGCAACACTCATTAGTTAGCTTCAA
AAAAATTATTGATTATTTTGGAGACTGTGAAAAAGCCACTCAACATGATGGTTTAGCAAAGTGGCAATCTCTTGGCTTAC
ATGCTAATCACTTAAAGCGTCTAAACGAGTTTCAAACGGCGCAAGGTCAAACCGAGTTTGAACGACTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTAACGCCAGATGATGTTGGTTATCCAACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAAGCATTATTACAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCTAGCCCAC
ATGGTCGTCAGGTGGCTTATGATTTTGCCTATTATTTAAGTGAAAAAGGTTTTTATGTAAGTAGCGGCTTGGCATACGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCTGTTCATCAACGTACGATAGCAGTGACAGGTACAGGTTTAGACAGTACCTA
TCCAGCTCAAAATAAAAAATTGGCAGAACATATTCTGGCTCAGAACGGCGCCATCATTAGTGAGTTTTTACCGGGAACAC
CACCTCTACAGCAGCATTTTCCACGTAGAAACCGAATTGTTAGCGGTCTGAGTTTAGGCGTATTAGTTGTAGAAGCGACT
TTAAAAAGTGGCTCCCTCATTACTGCCAATAAAGCAGCTGAGCAAGGCAAAATCGTATTTGCCATTCCCGGTCATATTTA
CAGTGAATTTCATCAAGGTTGCCATCAACTTATTCGTGAAGGTGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTCGCCCTACCCACCCAATGGCAGAGCCAACAAAACTCAACAGAGGAGGCAATCGTTTCTTGCACCCCAGAAATTCCA
GAGCATTTGATTAATCTTTATCAATCTTTAGACTGGGTAGGCCAAAATATTGACCAGCTTGTTTTGCACCATTCACAACC
TGTTTCTGAACTCACCTCATCACTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGATTGTATTTACGTT
GTCGTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H2NKZ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

90.691

100

0.907

  dprA Acinetobacter baumannii D1279779

90.691

100

0.907

  dprA Acinetobacter baylyi ADP1

71.391

100

0.723

  dprA Vibrio cholerae strain A1552

43.505

88.032

0.383