Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   IC796_RS18505 Genome accession   NZ_CP061561
Coordinates   3801576..3802706 (+) Length   376 a.a.
NCBI ID   WP_151685295.1    Uniprot ID   A0A7H2PQV0
Organism   Acinetobacter seifertii strain AS73     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3796576..3807706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC796_RS18480 (IC796_18470) - 3796843..3797049 (-) 207 WP_039252952.1 hypothetical protein -
  IC796_RS18485 (IC796_18475) - 3797102..3799213 (-) 2112 WP_151742550.1 TonB-dependent copper receptor -
  IC796_RS18490 (IC796_18480) - 3799287..3799712 (-) 426 WP_004705923.1 DUF2946 family protein -
  IC796_RS18495 (IC796_18485) def 3799748..3800278 (-) 531 WP_004705924.1 peptide deformylase -
  IC796_RS18500 (IC796_18490) tsaP 3800401..3801555 (+) 1155 WP_151685293.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  IC796_RS18505 (IC796_18495) dprA 3801576..3802706 (+) 1131 WP_151685295.1 DNA-processing protein DprA Machinery gene
  IC796_RS18510 (IC796_18500) - 3802757..3803326 (+) 570 WP_019458003.1 L-threonylcarbamoyladenylate synthase -
  IC796_RS18515 (IC796_18505) - 3803716..3804636 (-) 921 WP_100290930.1 DMT family transporter -
  IC796_RS18520 (IC796_18510) - 3804743..3805396 (-) 654 WP_151685296.1 TetR/AcrR family transcriptional regulator -
  IC796_RS18525 (IC796_18515) - 3805532..3806746 (+) 1215 WP_039252932.1 MFS transporter -
  IC796_RS18530 (IC796_18520) - 3806767..3807531 (+) 765 WP_086496015.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41849.42 Da        Isoelectric Point: 6.4978

>NTDB_id=483225 IC796_RS18505 WP_151685295.1 3801576..3802706(+) (dprA) [Acinetobacter seifertii strain AS73]
MLSQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGDCEKATQPDGLAKWQSLGLHANHLKRLNDFQTTQGQTEFERLIQQV
QQHTDFILTPDDAGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASVHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIISEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAN
LKSGSLITANKAAEQGKIVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQNSTEEAIVSCTPEIP
EHLINLYQSLDWVGQNIDQLVLHHSQPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=483225 IC796_RS18505 WP_151685295.1 3801576..3802706(+) (dprA) [Acinetobacter seifertii strain AS73]
ATGCTTAGTCAACTTTCTTCACACCATTACCACACACTTAAAGTGTGGTATTTGGTGCAACACTCGTTAGTTAGCTTCAA
AAAAATTATTGATTATTTTGGAGACTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGCAATCTCTTGGCTTAC
ATGCTAATCACTTAAAGCGTCTAAACGATTTTCAAACGACGCAAGGTCAAACCGAGTTTGAACGACTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACACCAGATGATGCTGGCTATCCAACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAAGCATTATTACAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCTAGCCCAC
ATGGTCGTCAGGTGGCTTATGATTTTGCCTATTATTTAAGTGAAAAGGGTTTTTATGTAAGTAGTGGCTTGGCATACGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCTGTTCATCAACGTACGATAGCAGTGACAGGTACAGGTTTAGACAGTACCTA
TCCAGCTCAAAATAAAAAATTAGCAGAACATATTCTGGCTCAGAACGGCGCCATCATTAGTGAGTTTTTACCGGGAACAC
CACCACTACAGCAGCATTTTCCACGTAGAAACCGAATTGTTAGCGGTCTGAGTTTAGGCGTATTAGTTGTAGAAGCGAAT
TTAAAAAGTGGCTCCCTCATTACTGCCAATAAAGCAGCTGAGCAAGGCAAAATCGTATTTGCCATTCCCGGTCATATTTA
CAGTGAATTTCATCAAGGTTGCCATCAACTTATTCGTGAAGGTGCAATTTTAGTCGATCACCCTGAACAAATTATTGAAG
ACCTCGCCCTACCCACCCAATGGCAGAGCCAACAAAACTCAACAGAGGAGGCAATCGTTTCTTGCACCCCAGAAATTCCA
GAGCATTTGATTAATCTTTATCAGTCTTTAGACTGGGTAGGCCAAAATATTGACCAGCTTGTTTTGCATCATTCACAACC
TGTTTCTGAACTCACCTCATCATTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGATTGTATTTACGTT
GTCGTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H2PQV0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.691

100

0.907

  dprA Acinetobacter baumannii strain A118

90.426

100

0.904

  dprA Acinetobacter baylyi ADP1

71.129

100

0.721

  dprA Vibrio cholerae strain A1552

43.807

88.032

0.386