Detailed information NTG0048300

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PSTAA_RS18655
• Genome accession: NC_017532
• Coordinates: 3995764..3997101 (+)
• Length: 445 a.a.
• NCBI ID: WP_026006503.1
• Uniprot ID: A0A137YGV3
• Organism: Stutzerimonas stutzeri DSM 4166
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3990764..4002101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAA_RS18630 (PSTAA_3735)	pgeF	3990794..3991531 (-)	738	WP_014597753.1	peptidoglycan editing factor PgeF	-
PSTAA_RS18635 (PSTAA_3736)	rluD	3991528..3992502 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PSTAA_RS18640 (PSTAA_3737)	-	3992707..3993696 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
PSTAA_RS18645 (PSTAA_3738)	-	3993818..3994051 (+)	234	WP_013984074.1	PP0621 family protein	-
PSTAA_RS18650 (PSTAA_3739)	pilS	3994041..3995633 (+)	1593	WP_013984075.1	sensor histidine kinase	Regulator
PSTAA_RS18655 (PSTAA_3740)	pilR	3995764..3997101 (+)	1338	WP_026006503.1	sigma-54-dependent transcriptional regulator	Regulator
PSTAA_RS18660 (PSTAA_3741)	-	3997145..3998203 (-)	1059	WP_011914666.1	DUF2333 family protein	-
PSTAA_RS18665 (PSTAA_3742)	-	3998421..4000016 (+)	1596	WP_014597755.1	response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49558.09 Da
• Isoelectric Point: 6.4140

>NTDB_id=48300 PSTAA_RS18655 WP_026006503.1 3995764..3997101(+) (pilR) [Stutzerimonas stutzeri DSM 4166]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=48300 PSTAA_RS18655 WP_026006503.1 3995764..3997101(+) (pilR) [Stutzerimonas stutzeri DSM 4166]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTAAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGTGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTTCTCACCAAACCGGT
GGACCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAGGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCCGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAACG
ACTGGGGCTGACCTTCCGCTCGATGCGCTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: A0A137YGV3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382