Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   J7T60_RS03715 Genome accession   NZ_CP072436
Coordinates   693960..694607 (-) Length   215 a.a.
NCBI ID   WP_372433530.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 688960..699607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS03700 (J7T60_03675) holA 690708..691742 (+) 1035 WP_002946639.1 DNA polymerase III subunit delta -
  J7T60_RS03705 (J7T60_03680) sodA 691836..692441 (+) 606 WP_011680996.1 superoxide dismutase SodA -
  J7T60_RS03710 (J7T60_03685) - 692541..693920 (+) 1380 WP_372433529.1 serine hydrolase -
  J7T60_RS03715 (J7T60_03690) cclA/cilC 693960..694607 (-) 648 WP_372433530.1 A24 family peptidase Machinery gene
  J7T60_RS03720 (J7T60_03695) - 694716..695237 (+) 522 WP_065973087.1 Dps family protein -
  J7T60_RS03725 (J7T60_03700) - 695326..695763 (+) 438 WP_179971287.1 Fur family transcriptional regulator -
  J7T60_RS03730 (J7T60_03705) - 695874..696080 (+) 207 WP_002950395.1 YqgQ family protein -
  J7T60_RS03735 (J7T60_03710) - 696073..697041 (+) 969 WP_082308904.1 ROK family glucokinase -
  J7T60_RS03740 (J7T60_03715) typA 697179..699026 (+) 1848 WP_176243530.1 translational GTPase TypA -
  J7T60_RS03745 (J7T60_03720) - 699050..699322 (+) 273 WP_002950398.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 24876.96 Da        Isoelectric Point: 8.3836

>NTDB_id=482875 J7T60_RS03715 WP_372433530.1 693960..694607(-) (cclA/cilC) [Streptococcus thermophilus strain S24735]
MLSILYFFLGTSLGSFIGLICDRFPEKSIIFPRSHCNQCGHPLRFFEMIPILSQLFLRFKCRLCQSSIPYRYLFLELFCG
GILLLYFYDYLDFGRTYLLFFSLCLTIFDLKNKSYPLLIWILGTLPLLCLGNHYLTFSLGISLAVLSYIKRLNIGEGDFL
YLASVSLIFPFSKILIAIELACSFGLMYFLVRKNSNETVAFVPFLFMSVLILTFM

Nucleotide


Download         Length: 648 bp        

>NTDB_id=482875 J7T60_RS03715 WP_372433530.1 693960..694607(-) (cclA/cilC) [Streptococcus thermophilus strain S24735]
ATGCTTAGTATTTTATATTTTTTTCTTGGTACCTCTTTAGGCTCGTTTATTGGATTGATTTGTGATCGTTTTCCTGAGAA
GTCGATTATTTTTCCTAGAAGCCATTGCAATCAGTGTGGGCATCCGTTACGTTTTTTCGAAATGATTCCGATCCTATCAC
AACTTTTCTTAAGGTTCAAATGTCGGTTATGTCAAAGCTCTATCCCATACCGTTACCTCTTCTTGGAATTGTTTTGTGGA
GGAATACTTCTTCTTTATTTCTATGACTACCTAGATTTCGGAAGAACCTATTTGCTTTTTTTCAGTCTTTGTCTAACTAT
TTTTGATTTAAAAAATAAATCATATCCCCTTCTAATTTGGATTCTTGGAACACTACCTCTCCTATGTTTGGGAAACCACT
ACCTCACTTTTAGCTTAGGAATAAGTTTAGCCGTTCTGTCATATATCAAACGTTTAAATATTGGTGAAGGTGATTTTCTC
TATTTGGCCAGTGTCTCCCTCATTTTCCCATTTTCCAAAATACTAATAGCTATTGAACTAGCTTGCTCATTTGGGCTTAT
GTACTTCCTAGTACGTAAAAACTCTAATGAAACAGTCGCTTTTGTCCCATTTCTCTTTATGAGTGTTCTAATTCTTACCT
TCATGTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

39.72

99.535

0.395
  cclA/cilC Streptococcus pneumoniae TIGR4

39.72

99.535

0.395
  cclA/cilC Streptococcus mitis NCTC 12261

39.252

99.535

0.391
  cclA/cilC Streptococcus pneumoniae Rx1

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae D39

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae R6

38.785

99.535

0.386