Detailed information NTG0482123

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7T78_RS09625
• Genome accession: NZ_CP072427
• Coordinates: 1856127..1857395 (-)
• Length: 422 a.a.
• NCBI ID: WP_138496457.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24750
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1851127..1862395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T78_RS09595 (J7T78_09555)	-	1851388..1852215 (+)	828	WP_232085691.1	radical SAM protein	-
J7T78_RS09600 (J7T78_09560)	-	1852208..1853749 (+)	1542	WP_014622049.1	ABC transporter ATP-binding protein	-
J7T78_RS09605 (J7T78_09565)	-	1854153..1854665 (-)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7T78_RS09610 (J7T78_09570)	-	1854981..1855685 (+)	705	Protein_1850	site-specific integrase	-
J7T78_RS09625 (J7T78_09585)	rarA	1856127..1857395 (-)	1269	WP_138496457.1	replication-associated recombination protein A	Machinery gene
J7T78_RS09630 (J7T78_09590)	rpmB	1857565..1857753 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
J7T78_RS09635 (J7T78_09595)	-	1857880..1858146 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7T78_RS09640 (J7T78_09600)	ruvX	1858146..1858565 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7T78_RS09645 (J7T78_09605)	-	1858674..1858979 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7T78_RS09650 (J7T78_09610)	-	1859192..1860838 (+)	1647	WP_138496459.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46448.01 Da
• Isoelectric Point: 7.0888

>NTDB_id=482123 J7T78_RS09625 WP_138496457.1 1856127..1857395(-) (rarA) [Streptococcus thermophilus strain S24750]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVEKSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=482123 J7T78_RS09625 WP_138496457.1 1856127..1857395(-) (rarA) [Streptococcus thermophilus strain S24750]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAAAAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59