Detailed information NTG0481538

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ICJ61_RS13375
• Genome accession: NZ_CP061284
• Coordinates: 2584613..2585230 (-)
• Length: 205 a.a.
• NCBI ID: WP_151175157.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XH-1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2579613..2590230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICJ61_RS13345 (ICJ61_13345)	rpsT	2579916..2580182 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
ICJ61_RS13350 (ICJ61_13350)	holA	2580197..2581240 (-)	1044	WP_188323141.1	DNA polymerase III subunit delta	-
ICJ61_RS13355 (ICJ61_13355)	-	2581280..2581429 (-)	150	WP_151175156.1	hypothetical protein	-
ICJ61_RS13360 (ICJ61_13360)	-	2581470..2581604 (+)	135	WP_010335005.1	YqzM family protein	-
ICJ61_RS13365 (ICJ61_13365)	comEC	2581643..2583973 (-)	2331	WP_188323815.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ICJ61_RS13370 (ICJ61_13370)	-	2583977..2584546 (-)	570	WP_010335007.1	ComE operon protein 2	-
ICJ61_RS13375 (ICJ61_13375)	comEA	2584613..2585230 (-)	618	WP_151175157.1	helix-hairpin-helix domain-containing protein	Machinery gene
ICJ61_RS13380 (ICJ61_13380)	comER	2585314..2586135 (+)	822	WP_188323142.1	late competence protein ComER	-
ICJ61_RS13385 (ICJ61_13385)	-	2586200..2586943 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
ICJ61_RS13390 (ICJ61_13390)	rsfS	2586940..2587296 (-)	357	WP_024122115.1	ribosome silencing factor	-
ICJ61_RS13395 (ICJ61_13395)	yqeK	2587314..2587874 (-)	561	WP_095713321.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ICJ61_RS13400 (ICJ61_13400)	-	2587864..2588433 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
ICJ61_RS13405 (ICJ61_13405)	yhbY	2588444..2588734 (-)	291	WP_188323143.1	ribosome assembly RNA-binding protein YhbY	-
ICJ61_RS13410 (ICJ61_13410)	aroE	2588734..2589570 (-)	837	WP_038954228.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22045.89 Da
• Isoelectric Point: 4.8695

>NTDB_id=481538 ICJ61_RS13375 WP_151175157.1 2584613..2585230(-) (comEA) [Bacillus halotolerans strain XH-1]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=481538 ICJ61_RS13375 WP_151175157.1 2584613..2585230(-) (comEA) [Bacillus halotolerans strain XH-1]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTAAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAATACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGACCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (64-119)

• Helix-hairpin-helix motif (HHH_3) (141-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Staphylococcus aureus N315	37.387	100	0.405
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38