Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   NMAA_RS10330 Genome accession   NC_017512
Coordinates   1969855..1970553 (-) Length   232 a.a.
NCBI ID   WP_002215673.1    Uniprot ID   A0A0U1RKJ4
Organism   Neisseria meningitidis WUE 2594     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1964855..1975553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMAA_RS10315 (NMAA_1699) - 1965132..1966211 (-) 1080 WP_002253455.1 peptidylprolyl isomerase -
  NMAA_RS10320 (NMAA_1700) - 1966316..1968724 (-) 2409 WP_002245292.1 LPS-assembly protein LptD -
  NMAA_RS10325 (NMAA_1701) amgK 1968794..1969798 (+) 1005 WP_002215675.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  NMAA_RS10330 (NMAA_1702) dsbA1 1969855..1970553 (-) 699 WP_002215673.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMAA_RS15865 - 1970847..1970954 (-) 108 Protein_1937 IS5/IS1182 family transposase -
  NMAA_RS10335 (NMAA_1703) murJ 1971012..1972550 (+) 1539 WP_002245840.1 murein biosynthesis integral membrane protein MurJ -
  NMAA_RS10340 (NMAA_1704) - 1972683..1973639 (+) 957 WP_002236650.1 YheT family hydrolase -
  NMAA_RS10345 (NMAA_1705) trpC 1973690..1974472 (+) 783 WP_002245839.1 indole-3-glycerol phosphate synthase TrpC -

Sequence


Protein


Download         Length: 232 a.a.        Molecular weight: 25245.84 Da        Isoelectric Point: 5.6016

>NTDB_id=47882 NMAA_RS10330 WP_002215673.1 1969855..1970553(-) (dsbA1) [Neisseria meningitidis WUE 2594]
MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAH

Nucleotide


Download         Length: 699 bp        

>NTDB_id=47882 NMAA_RS10330 WP_002215673.1 1969855..1970553(-) (dsbA1) [Neisseria meningitidis WUE 2594]
ATGAAATCCAAACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCACTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACTGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTCGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCTTACGAATCTCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCACTAA

Domains


Predicted by InterproScan.

(63-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U1RKJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

98.707

100

0.987

  dsbA2 Neisseria meningitidis MC58

76.882

80.172

0.616


Multiple sequence alignment