Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   J1N58_RS01235 Genome accession   NZ_CP071697
Coordinates   244960..247293 (+) Length   777 a.a.
NCBI ID   WP_207560434.1    Uniprot ID   -
Organism   Streptococcus suis strain 1112S     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 239960..252293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1N58_RS01215 (J1N58_01215) treP 240575..242569 (-) 1995 WP_024378076.1 PTS system trehalose-specific EIIBC component -
  J1N58_RS01220 (J1N58_01220) treR 242792..243505 (+) 714 WP_024378075.1 trehalose operon repressor Regulator
  J1N58_RS01225 (J1N58_01225) - 243563..243874 (+) 312 WP_029177093.1 hypothetical protein -
  J1N58_RS01230 (J1N58_01230) - 243871..244419 (+) 549 WP_029177092.1 CvpA family protein -
  J1N58_RS01235 (J1N58_01235) mutS/mutS2 244960..247293 (+) 2334 WP_207560434.1 endonuclease MutS2 Machinery gene
  J1N58_RS01240 (J1N58_01240) - 247415..248728 (+) 1314 Protein_213 IS1182 family transposase -
  J1N58_RS11720 - 248876..249274 (-) 399 WP_029180393.1 hypothetical protein -
  J1N58_RS01250 (J1N58_01250) - 249500..249727 (+) 228 WP_024376261.1 hypothetical protein -
  J1N58_RS01255 (J1N58_01255) - 249708..250013 (+) 306 WP_044672279.1 hypothetical protein -
  J1N58_RS01260 (J1N58_01260) - 250304..250645 (+) 342 WP_024378069.1 LytTR family DNA-binding domain-containing protein -
  J1N58_RS01265 (J1N58_01265) comE/blpR 250645..251385 (+) 741 WP_024376264.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87616.33 Da        Isoelectric Point: 6.6500

>NTDB_id=478349 J1N58_RS01235 WP_207560434.1 244960..247293(+) (mutS/mutS2) [Streptococcus suis strain 1112S]
MNSKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSMAATSDIGPAMRRLEL
DTDLNISELLAVKRVLEVSKTLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLVPEVVDLSKNKVLKKAKIQRAAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLTKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=478349 J1N58_RS01235 WP_207560434.1 244960..247293(+) (mutS/mutS2) [Streptococcus suis strain 1112S]
ATGAATAGTAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTGCGACAGTTGGAGCCTATGGTGGAAGTCCACCGTATCCAACAGGCCTTTGACGAGTTGACAGATATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGCATGGCTGCTACGAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCTCAGAATTATTGGCAGTCAAGCGAGTCTTGGAAGTGTCCAAAACTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGTCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAAGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCTGGGGTTGTCCATGACATTTCAGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGCGCTAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTGATTGCTGAGCCCGTTCCAAACGACCTTTATTTTGGCAGTCAG
TTGACAGCGATTGTCATTACAGGTCCCAACACGGGTGGTAAGACTATCATGCTCAAGACCTTGGGTTTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATCTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAAATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTCTTTGACGAGTTGGGAGCGGGGACAGATCCGCAGGAGGGGGCATCCTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGCATCAAGACCATGGCGACTACCCACTACCCTGAGCTCAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTGTCGGACATCATTATCCAGTCGGCTCAGTCTTGGACCGATAC
AGATAGCGACGTCAATCGAATTATCGAGAAGTTAGAGAGCCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTGAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGTGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTGCTGAAGAAAGCTAAAATTCAGCGAGCTGCCAAGGTGGGTGATGATATTATCGTCACAGCCTAT
GGTCAGCGAGGCACATTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCCCAGGTTGGCTTGATTAAGATGACCTTGAC
CAAGGATGAGTTTGAACTGGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAGCGCCAGGTTCACACGGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCTCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAGTTTATC
GACCAAGCTCTGCTCAACAACCTAGCCCAAGTCGATATTGTTCACGGTATCGGTACAGGGGTTATCCGAGAAGGGGTGAC
CAAGTACCTCCGTCGCAACAAGCAGGTCAAGGAATTTGGCTATGCTCCACAAAATGCAGGTGGTTCAGGTTGTACCATTG
TGACCTTTAAGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.646

100

0.404