Detailed information NTG0477241

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: J1G50_RS09535
• Genome accession: NZ_CP071489
• Coordinates: 1926085..1926759 (+)
• Length: 224 a.a.
• NCBI ID: WP_160404950.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain YHP1815
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1921085..1931759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1G50_RS09500 (J1G50_09500)	rpmG	1922085..1922255 (-)	171	WP_005624479.1	50S ribosomal protein L33	-
J1G50_RS09505 (J1G50_09505)	rpmB	1922267..1922503 (-)	237	WP_006251446.1	50S ribosomal protein L28	-
J1G50_RS09510 (J1G50_09510)	radC	1922629..1923345 (-)	717	WP_021113221.1	RadC family protein	Machinery gene
J1G50_RS09515 (J1G50_09515)	coaBC	1923515..1924720 (+)	1206	WP_021119360.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
J1G50_RS09520 (J1G50_09520)	dut	1924717..1925172 (+)	456	WP_021119359.1	dUTP diphosphatase	-
J1G50_RS09525 (J1G50_09525)	slmA	1925181..1925786 (+)	606	WP_021114417.1	nucleoid occlusion factor SlmA	-
J1G50_RS09530 (J1G50_09530)	-	1925794..1926018 (+)	225	WP_005713165.1	YheU family protein	-
J1G50_RS09535 (J1G50_09535)	crp	1926085..1926759 (+)	675	WP_160404950.1	cAMP-activated global transcriptional regulator CRP	Regulator
J1G50_RS09540 (J1G50_09540)	-	1927014..1927265 (+)	252	WP_223300025.1	hypothetical protein	-
J1G50_RS09545 (J1G50_09545)	-	1927304..1927450 (+)	147	WP_021110348.1	hypothetical protein	-
J1G50_RS09550 (J1G50_09550)	pyrD	1927571..1928578 (-)	1008	WP_021111227.1	quinone-dependent dihydroorotate dehydrogenase	-
J1G50_RS09555 (J1G50_09555)	-	1928825..1929775 (-)	951	WP_005713153.1	ribose-phosphate pyrophosphokinase	-
J1G50_RS09560 (J1G50_09560)	ispE	1929803..1930648 (-)	846	WP_021113204.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	-
J1G50_RS09565 (J1G50_09565)	lolB	1930650..1931282 (-)	633	WP_015940037.1	lipoprotein insertase outer membrane protein LolB	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25234.25 Da
• Isoelectric Point: 6.9079

>NTDB_id=477241 J1G50_RS09535 WP_160404950.1 1926085..1926759(+) (crp) [Glaesserella parasuis strain YHP1815]
MQDVSISTAQLEDVSPLPSIHDPAVEWFLTHCHIHRYPAKYTLIHAGEDAESLFYIVSGAVSVFIKDEEGKEMLLTNLVQ
GEFVGEISLFEEKAQPRTAWVRTKGNCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRMTSRQVSNLAFLDVTGRIAQ
TLMNLAKMPDAMTHPQGMQIKITRQEIGQMVGCSRETVGRILKMLEDEGLISAHGKTIVVYGTR

Nucleotide

• Length: 675 bp

>NTDB_id=477241 J1G50_RS09535 WP_160404950.1 1926085..1926759(+) (crp) [Glaesserella parasuis strain YHP1815]
ATGCAAGATGTTTCAATCTCAACCGCACAGCTTGAAGATGTCAGCCCATTACCATCCATTCACGATCCTGCGGTGGAATG
GTTTTTAACTCACTGTCATATTCATCGTTATCCAGCAAAATATACTTTAATTCACGCAGGTGAAGATGCTGAATCACTGT
TTTATATTGTCAGCGGAGCTGTGTCTGTCTTTATCAAGGATGAAGAAGGCAAGGAGATGTTATTAACCAATTTAGTCCAA
GGCGAATTTGTCGGTGAAATCAGCCTTTTTGAAGAAAAGGCTCAGCCTCGCACTGCTTGGGTAAGAACTAAAGGTAACTG
TGAAATTGCTGAAATTTCTTATAAAAAATTCAAGCAATTAGTGCATCTTAATCCAGATATTTTGATGTATTTATCCGCAC
AGATGGCTCGCCGTTTACGAATGACATCAAGACAGGTTAGTAACCTAGCATTTCTTGATGTAACAGGTCGTATTGCTCAA
ACATTGATGAATTTAGCTAAAATGCCTGATGCGATGACTCACCCTCAGGGTATGCAGATTAAAATTACTCGCCAAGAAAT
TGGTCAAATGGTTGGTTGCTCACGAGAAACTGTAGGTCGTATTTTGAAAATGCTGGAGGATGAAGGGTTAATTTCTGCAC
ATGGTAAAACTATCGTTGTGTATGGGACAAGATAA

Domains

Predicted by InterProScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (35-121)

• Crp-like helix-turn-helix domain (HTH_Crp_2) (156-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	75.862	90.625	0.687
crp	Haemophilus influenzae Rd KW20	72.906	90.625	0.661
crp	Acinetobacter baumannii D1279779	48	89.286	0.429