Detailed information NTG0476654

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: JZY07_RS00775
• Genome accession: NZ_CP071305
• Coordinates: 124492..124926 (+)
• Length: 144 a.a.
• NCBI ID: WP_079268055.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SC183
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 119492..129926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZY07_RS00740 (JZY07_00740)	-	120232..120606 (+)	375	WP_024412237.1	DUF1033 family protein	-
JZY07_RS00745 (JZY07_00745)	-	120634..121584 (-)	951	WP_024412238.1	S66 peptidase family protein	-
JZY07_RS00750 (JZY07_00750)	comGA	121670..122620 (+)	951	WP_024412239.1	competence type IV pilus ATPase ComGA	Machinery gene
JZY07_RS00755 (JZY07_00755)	comGB	122532..123569 (+)	1038	WP_050571918.1	competence type IV pilus assembly protein ComGB	Machinery gene
JZY07_RS00760 (JZY07_00760)	comGC	123571..123852 (+)	282	WP_024387069.1	competence type IV pilus major pilin ComGC	Machinery gene
JZY07_RS00765 (JZY07_00765)	comGD	123833..124240 (+)	408	WP_024387070.1	competence type IV pilus minor pilin ComGD	Machinery gene
JZY07_RS00770 (JZY07_00770)	comGE	124212..124505 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
JZY07_RS00775 (JZY07_00775)	comGF/cglF	124492..124926 (+)	435	WP_079268055.1	competence type IV pilus minor pilin ComGF	Machinery gene
JZY07_RS00780 (JZY07_00780)	comGG	124904..125431 (+)	528	WP_024399584.1	competence type IV pilus minor pilin ComGG	-
JZY07_RS00785 (JZY07_00785)	-	125577..126440 (+)	864	WP_105141859.1	IS982 family transposase	-
JZY07_RS00790 (JZY07_00790)	-	126685..126852 (-)	168	WP_171992300.1	hypothetical protein	-
JZY07_RS11475	-	126896..127156 (-)	261	WP_228380968.1	hypothetical protein	-
JZY07_RS11480	-	127348..127563 (-)	216	WP_228380969.1	hypothetical protein	-
JZY07_RS11485	-	127612..127809 (-)	198	WP_228380148.1	hypothetical protein	-
JZY07_RS00805 (JZY07_00805)	-	127806..128645 (-)	840	WP_024399985.1	ATP-binding protein	-
JZY07_RS00810 (JZY07_00810)	-	128657..129501 (-)	845	Protein_128	phage replisome organizer N-terminal domain-containing protein	-
JZY07_RS00815 (JZY07_00815)	-	129491..129769 (-)	279	WP_024399988.1	hypothetical protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16485.85 Da
• Isoelectric Point: 8.8227

>NTDB_id=476654 JZY07_RS00775 WP_079268055.1 124492..124926(+) (comGF/cglF) [Streptococcus suis strain SC183]
MLKSKIPAFTLLECLVALVILSGSLLIFEGLSKLLVQEAHYHRQSVQKEWLVFSSQLRSEWDQSELVKVENGKVYVNKAG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=476654 JZY07_RS00775 WP_079268055.1 124492..124926(+) (comGF/cglF) [Streptococcus suis strain SC183]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGCTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCACCGTCAATCTGTCCAAAAGGAGTGGCTAGTATTTT
CTAGTCAGTTGCGGTCGGAATGGGACCAGTCGGAATTAGTCAAGGTTGAAAATGGCAAGGTCTATGTCAATAAGGCTGGA
CAAGCATTAGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACCAATGATAGGGGTCAGGGCTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae Rx1	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae D39	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae R6	54.61	97.917	0.535
comGF/cglF	Streptococcus mitis NCTC 12261	55.224	93.056	0.514
comGF	Streptococcus mutans UA140	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comGF	Streptococcus mutans UA159	48.611	100	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444