Detailed information NTG0047507

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: I653_RS13010
• Genome accession: NC_020832
• Coordinates: 2610781..2611386 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis str. BAB-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2605781..2616386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I653_RS12980 (I653_13175)	-	2606594..2606983 (+)	390	WP_015483510.1	TIGR04086 family membrane protein	-
I653_RS12985 (I653_13180)	yajC	2607040..2607306 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
I653_RS12990 (I653_13185)	tgt	2607343..2608488 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
I653_RS12995 (I653_13190)	queA	2608515..2609543 (-)	1029	WP_015483511.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
I653_RS13000 (I653_13195)	yrzS	2609573..2609773 (-)	201	WP_015384252.1	DUF2905 domain-containing protein	-
I653_RS13005 (I653_13200)	ruvB	2609766..2610770 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I653_RS13010 (I653_13205)	ruvA	2610781..2611386 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
I653_RS13015 (I653_13210)	bofC	2611525..2612037 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
I653_RS13020 (I653_13215)	csbX	2612085..2613392 (-)	1308	WP_015483512.1	MFS transporter	-
I653_RS13025 (I653_13220)	iolG	2613463..2614488 (-)	1026	WP_015483513.1	inositol 2-dehydrogenase	-
I653_RS13030 (I653_13225)	yrzF	2614726..2615373 (+)	648	WP_015483514.1	phosphotransferase	-
I653_RS21080 (I653_13230)	-	2615419..2615541 (-)	123	WP_003229707.1	hypothetical protein	-
I653_RS21085 (I653_13235)	-	2615746..2616072 (+)	327	WP_175950709.1	DUF5412 family protein	-
I653_RS20660 (I653_13240)	-	2616079..2616219 (+)	141	WP_015483515.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=47507 I653_RS13010 WP_003229717.1 2610781..2611386(-) (ruvA) [Bacillus subtilis subsp. subtilis str. BAB-1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=47507 I653_RS13010 WP_003229717.1 2610781..2611386(-) (ruvA) [Bacillus subtilis subsp. subtilis str. BAB-1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408