Detailed information NTG0474722

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JOW61_RS14125
• Genome accession: NZ_CP070844
• Coordinates: 2608310..2608915 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. natto strain BN0
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2603310..2613915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOW61_RS14095 (JOW61_13965)	-	2604123..2604512 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
JOW61_RS14100 (JOW61_13970)	yajC	2604569..2604835 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
JOW61_RS14105 (JOW61_13975)	tgt	2604872..2606017 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
JOW61_RS14110 (JOW61_13980)	queA	2606044..2607072 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JOW61_RS14115 (JOW61_13985)	yrzS	2607102..2607302 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
JOW61_RS14120 (JOW61_13990)	ruvB	2607295..2608299 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JOW61_RS14125 (JOW61_13995)	ruvA	2608310..2608915 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
JOW61_RS14130 (JOW61_14000)	bofC	2609054..2609566 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
JOW61_RS14135 (JOW61_14005)	csbX	2609614..2610921 (-)	1308	WP_014480439.1	MFS transporter	-
JOW61_RS14140 (JOW61_14010)	iolG	2610992..2612017 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
JOW61_RS14145 (JOW61_14015)	yrzF	2612255..2612902 (+)	648	WP_014480441.1	phosphotransferase	-
JOW61_RS14150 (JOW61_14020)	-	2612948..2613070 (-)	123	WP_003229707.1	hypothetical protein	-
JOW61_RS14155	-	2613155..2613229 (+)	75	Protein_2740	hypothetical protein	-
JOW61_RS14160 (JOW61_14025)	-	2613233..2613601 (+)	369	WP_186437837.1	DUF5412 family protein	-
JOW61_RS14165 (JOW61_14030)	-	2613608..2613748 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=474722 JOW61_RS14125 WP_003229717.1 2608310..2608915(-) (ruvA) [Bacillus subtilis subsp. natto strain BN0]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=474722 JOW61_RS14125 WP_003229717.1 2608310..2608915(-) (ruvA) [Bacillus subtilis subsp. natto strain BN0]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408