Detailed information NTG0474478

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H7F27_RS03230
• Genome accession: NZ_CP060193
• Coordinates: 657345..658502 (+)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus sp. PAMC26543
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 652345..663502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F27_RS03210 (H7F27_03210)	tuaH	652811..654001 (+)	1191	WP_101860058.1	teichuronic acid biosynthesis protein TuaH	-
H7F27_RS03215 (H7F27_03215)	-	654145..655221 (+)	1077	WP_010332075.1	glycosyltransferase family 4 protein	-
H7F27_RS03220 (H7F27_03220)	-	655297..656475 (-)	1179	WP_185848556.1	LCP family protein	-
H7F27_RS03225 (H7F27_03225)	-	656475..657128 (-)	654	WP_101859864.1	YigZ family protein	-
H7F27_RS03230 (H7F27_03230)	degS	657345..658502 (+)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
H7F27_RS03235 (H7F27_03235)	degU	658585..659274 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
H7F27_RS03240 (H7F27_03240)	-	659371..660216 (+)	846	WP_101859865.1	DegV family protein	-
H7F27_RS03245 (H7F27_03245)	comFA	660323..661717 (+)	1395	WP_185848557.1	ATP-dependent helicase ComFA	Machinery gene
H7F27_RS03250 (H7F27_03250)	-	661774..662070 (+)	297	WP_103671256.1	late competence development ComFB family protein	-
H7F27_RS03255 (H7F27_03255)	comFC	662034..662756 (+)	723	WP_024123027.1	amidophosphoribosyltransferase	Machinery gene
H7F27_RS03260 (H7F27_03260)	-	662830..663249 (+)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=474478 H7F27_RS03230 WP_024123030.1 657345..658502(+) (degS) [Bacillus sp. PAMC26543]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=474478 H7F27_RS03230 WP_024123030.1 657345..658502(+) (degS) [Bacillus sp. PAMC26543]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAACTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGACTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTACTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGTCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTTCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992