Detailed information NTG0474188

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: H6X75_RS10085
• Genome accession: NZ_CP060156
• Coordinates: 1991222..1991626 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588006.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700608
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1986222..1996626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H6X75_RS10050 (H6X75_10040)	rnpA	1986637..1987008 (-)	372	WP_000739246.1	ribonuclease P protein component	-
H6X75_RS11300	-	1987025..1987156 (-)	132	WP_000768904.1	hypothetical protein	-
H6X75_RS10055 (H6X75_10045)	-	1987157..1988347 (-)	1191	WP_000167766.1	acetate kinase	-
H6X75_RS10060 (H6X75_10050)	comYH	1988398..1989351 (-)	954	WP_000345117.1	class I SAM-dependent methyltransferase	Machinery gene
H6X75_RS10065 (H6X75_10055)	-	1989412..1990005 (-)	594	Protein_1971	methyltransferase domain-containing protein	-
H6X75_RS10070 (H6X75_10060)	comGG/cglG	1990142..1990555 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
H6X75_RS10075 (H6X75_10065)	comGF/cglF	1990533..1990994 (-)	462	WP_000250530.1	competence type IV pilus minor pilin ComGF	Machinery gene
H6X75_RS10080 (H6X75_10070)	comGE/cglE	1990957..1991259 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
H6X75_RS10085 (H6X75_10075)	comGD/cglD	1991222..1991626 (-)	405	WP_000588006.1	competence type IV pilus minor pilin ComGD	Machinery gene
H6X75_RS10090 (H6X75_10080)	comGC/cglC	1991619..1991945 (-)	327	WP_000738638.1	comG operon protein ComGC	Machinery gene
H6X75_RS10095 (H6X75_10085)	comGB/cglB	1991947..1992963 (-)	1017	WP_075270915.1	competence type IV pilus assembly protein ComGB	Machinery gene
H6X75_RS10100 (H6X75_10090)	comGA/cglA/cilD	1992911..1993852 (-)	942	WP_000249556.1	competence type IV pilus ATPase ComGA	Machinery gene
H6X75_RS10105 (H6X75_10095)	-	1993927..1994292 (-)	366	WP_000286415.1	DUF1033 family protein	-
H6X75_RS10110 (H6X75_10100)	-	1994443..1995501 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=474188 H6X75_RS10085 WP_000588006.1 1991222..1991626(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700608]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=474188 H6X75_RS10085 WP_000588006.1 1991222..1991626(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700608]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGTCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae D39	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae R6	95.522	100	0.955
comGD/cglD	Streptococcus mitis NCTC 12261	95.489	99.254	0.948
comGD/cglD	Streptococcus mitis SK321	94.776	100	0.948
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47