Detailed information NTG0473341

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: H5028_RS01680
• Genome accession: NZ_CP060013
• Coordinates: 360524..361582 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain TP3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 355524..366582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H5028_RS01665 (H5028_01660)	-	356629..356961 (+)	333	WP_000169594.1	hypothetical protein	-
H5028_RS01670 (H5028_01665)	-	356964..357788 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
H5028_RS01675 (H5028_01670)	ponA	357806..360361 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
H5028_RS01680 (H5028_01675)	pilM	360524..361582 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
H5028_RS01685 (H5028_01680)	pilN	361582..362223 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
H5028_RS01690 (H5028_01685)	pilO	362220..362960 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
H5028_RS01695 (H5028_01690)	pilP	362971..363498 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
H5028_RS01700 (H5028_01695)	pilQ	363566..365731 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
H5028_RS01705 (H5028_01700)	aroK	365743..366312 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=473341 H5028_RS01680 WP_002014066.1 360524..361582(+) (pilM) [Acinetobacter baumannii strain TP3]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=473341 H5028_RS01680 WP_002014066.1 360524..361582(+) (pilM) [Acinetobacter baumannii strain TP3]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423