Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H4986_RS01555 | Genome accession | NZ_CP059971 |
| Coordinates | 289400..289702 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C34 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 284400..294702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4986_RS01520 (H4986_01520) | - | 284813..285574 (+) | 762 | WP_002872533.1 | ATP-binding protein | - |
| H4986_RS01525 (H4986_01525) | - | 285571..286257 (+) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| H4986_RS01530 (H4986_01530) | thiD | 286254..287066 (+) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H4986_RS01535 (H4986_01535) | thiE | 287056..287688 (+) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| H4986_RS01540 (H4986_01540) | hemD | 287666..288295 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H4986_RS01545 (H4986_01545) | - | 288292..288744 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| H4986_RS01550 (H4986_01550) | - | 288741..289403 (-) | 663 | WP_146314457.1 | hypothetical protein | - |
| H4986_RS01555 (H4986_01555) | ctsT | 289400..289702 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H4986_RS01560 (H4986_01560) | proC | 289699..290430 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H4986_RS01565 (H4986_01565) | fliW | 290430..290819 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H4986_RS01570 (H4986_01570) | - | 290980..291627 (+) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| H4986_RS01575 (H4986_01575) | lon | 291644..294019 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| H4986_RS01580 (H4986_01580) | rpsR | 294079..294339 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=472934 H4986_RS01555 WP_002853046.1 289400..289702(-) (ctsT) [Campylobacter jejuni strain C34]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472934 H4986_RS01555 WP_002853046.1 289400..289702(-) (ctsT) [Campylobacter jejuni strain C34]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |