Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   I6K87_RS06455 Genome accession   NZ_CP069892
Coordinates   1320355..1320681 (-) Length   108 a.a.
NCBI ID   WP_259334802.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1315355..1325681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS06440 (I6K87_06440) glmS 1315885..1317699 (-) 1815 WP_049533317.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
  I6K87_RS06445 (I6K87_06445) - 1318088..1319287 (-) 1200 WP_003028479.1 acetate kinase -
  I6K87_RS06450 (I6K87_06450) comGH 1319334..1320287 (-) 954 WP_003039058.1 class I SAM-dependent methyltransferase Machinery gene
  I6K87_RS06455 (I6K87_06455) comGG/cglG 1320355..1320681 (-) 327 WP_259334802.1 competence type IV pilus minor pilin ComGG Machinery gene
  I6K87_RS06460 (I6K87_06460) comGF/cglF 1320662..1321099 (-) 438 WP_204982485.1 competence type IV pilus minor pilin ComGF Machinery gene
  I6K87_RS06465 (I6K87_06465) comGE/cglE 1321083..1321376 (-) 294 WP_126406234.1 competence type IV pilus minor pilin ComGE Machinery gene
  I6K87_RS06470 (I6K87_06470) comGD 1321348..1321776 (-) 429 WP_037566697.1 competence type IV pilus minor pilin ComGD Machinery gene
  I6K87_RS06475 (I6K87_06475) comGC 1321736..1322053 (-) 318 WP_003028473.1 competence type IV pilus major pilin ComGC Machinery gene
  I6K87_RS06480 (I6K87_06480) comGB 1322050..1323072 (-) 1023 WP_180363191.1 competence type IV pilus assembly protein ComGB Machinery gene
  I6K87_RS06485 (I6K87_06485) comGA 1323014..1323955 (-) 942 WP_003028470.1 competence type IV pilus ATPase ComGA Machinery gene
  I6K87_RS06490 (I6K87_06490) - 1324025..1324390 (-) 366 WP_022525291.1 DUF1033 family protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12711.76 Da        Isoelectric Point: 10.7447

>NTDB_id=471012 I6K87_RS06455 WP_259334802.1 1320355..1320681(-) (comGG/cglG) [Streptococcus anginosus strain FDAARGOS_1357]
MWKQKVKAGIMLYALFIAAVFSLLLQFYLHRQTANHRNFTLNRERTQAYAMALLANENSKQREFDKGHVQDQKGEKELIL
TVTMKTGRRYQFSFPTEKVKQTGKELNK

Nucleotide


Download         Length: 327 bp        

>NTDB_id=471012 I6K87_RS06455 WP_259334802.1 1320355..1320681(-) (comGG/cglG) [Streptococcus anginosus strain FDAARGOS_1357]
GTGTGGAAACAGAAAGTTAAAGCGGGCATTATGCTCTATGCCCTCTTTATAGCGGCAGTTTTTAGCTTGCTTTTGCAATT
TTACCTTCATCGTCAAACTGCTAATCACAGGAATTTCACCCTAAACCGAGAACGAACACAAGCTTATGCAATGGCTCTTC
TAGCCAACGAAAATTCTAAGCAAAGAGAATTTGATAAAGGGCATGTCCAAGACCAAAAGGGTGAGAAAGAGCTCATCCTG
ACAGTAACAATGAAGACTGGTCGCCGTTATCAATTTTCCTTTCCGACTGAAAAAGTAAAGCAGACGGGTAAAGAATTGAA
TAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

47.059

94.444

0.444
  comGG/cglG Streptococcus mitis SK321

45.098

94.444

0.426
  comGG/cglG Streptococcus pneumoniae Rx1

43.564

93.519

0.407
  comGG/cglG Streptococcus pneumoniae D39

43.564

93.519

0.407
  comGG/cglG Streptococcus pneumoniae R6

43.564

93.519

0.407
  comGG/cglG Streptococcus pneumoniae TIGR4

43.564

93.519

0.407
  comGG Streptococcus mutans UA140

39.796

90.741

0.361
  comGG Streptococcus mutans UA159

39.796

90.741

0.361