Detailed information NTG0470624

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ToN1_RS09225
• Genome accession: NZ_CP059560
• Coordinates: 2017338..2018729 (-)
• Length: 463 a.a.
• NCBI ID: WP_169206173.1
• Uniprot ID: -
• Organism: Aromatoleum petrolei strain ToN1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2012338..2023729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ToN1_RS09215 (ToN1_18900)	pilA2	2014962..2015381 (+)	420	WP_169206171.1	pilin	Machinery gene
ToN1_RS09220 (ToN1_18910)	-	2015468..2017219 (+)	1752	WP_169206172.1	O-antigen ligase family protein	-
ToN1_RS09225 (ToN1_18920)	pilR	2017338..2018729 (-)	1392	WP_169206173.1	sigma-54 dependent transcriptional regulator	Regulator
ToN1_RS09230 (ToN1_18930)	-	2018726..2020294 (-)	1569	WP_169206174.1	ATP-binding protein	-
ToN1_RS09235 (ToN1_18940)	-	2020297..2020551 (-)	255	WP_169206175.1	PP0621 family protein	-
ToN1_RS09240 (ToN1_18950)	-	2020708..2021865 (-)	1158	WP_169206176.1	pyridoxal phosphate-dependent aminotransferase	-
ToN1_RS09245 (ToN1_18960)	mtnA	2021932..2022999 (+)	1068	WP_169206177.1	S-methyl-5-thioribose-1-phosphate isomerase	-
ToN1_RS09250 (ToN1_18970)	-	2022996..2023649 (+)	654	WP_169206178.1	class II aldolase/adducin family protein	-

Sequence

Protein

• Length: 463 a.a.
• Molecular weight: 50551.92 Da
• Isoelectric Point: 5.9646

>NTDB_id=470624 ToN1_RS09225 WP_169206173.1 2017338..2018729(-) (pilR) [Aromatoleum petrolei strain ToN1]
MNTSERRNRPAGIDVLVVDDEEDIREVLELSLLRMGLACDSAGTVEDARRLLAEKSYRLCLTDMRLPDGDGLDLVAHIQS
HSPGLPVAVITAFGSIETAIRALKCGAFDFVTKPVELKALRELVSHALKLQTAATPAPGAGGATRTLIGSSPALEHLRAQ
IAKLARNQAPVFIQGESGTGKEVIARLIHDLGPRASAPFVPVNCGAIPPELMESEFFGHRKGAFTGAVFDKDGLFQAARG
GTLFLDEVADLPLAMQVKLLRAIQERAVRPVGAHAEESVDVRILSASHRDLAQLVAGGKFRQDLYFRINVITLRVPPLRE
RPEDIPELAVHILARLAERDGVPPHRLAPDAVAALRQHSFPGNVRELENLLERACALCDGDEIRAGDIDLHPTEGIAQAL
LPFSAADSFAVETDVEPGGDGEDERVRILRMLDETRWNRSEAARRLGMTLRQLRYRLQKWGME

Nucleotide

• Length: 1392 bp

>NTDB_id=470624 ToN1_RS09225 WP_169206173.1 2017338..2018729(-) (pilR) [Aromatoleum petrolei strain ToN1]
ATGAATACATCCGAACGACGCAACCGCCCCGCGGGAATCGACGTCCTGGTCGTCGACGACGAGGAGGACATCCGCGAAGT
TCTGGAACTCTCGCTGCTACGCATGGGCCTCGCCTGCGATAGCGCCGGAACGGTCGAGGATGCGCGCCGCCTGCTGGCCG
AAAAGAGCTACCGCCTGTGCCTCACCGACATGCGCCTGCCCGACGGCGACGGGCTCGACCTGGTCGCGCACATCCAGTCG
CACTCGCCGGGCCTGCCCGTTGCCGTCATCACCGCCTTCGGCAGCATCGAGACCGCCATCCGCGCCCTGAAGTGCGGCGC
TTTCGACTTCGTCACCAAGCCGGTCGAGCTAAAGGCCCTGCGCGAGCTCGTCAGCCACGCGCTGAAACTGCAGACCGCTG
CCACCCCGGCACCCGGTGCCGGCGGCGCGACGCGCACCCTCATCGGCAGCTCCCCGGCGCTCGAGCACCTGCGTGCGCAG
ATCGCCAAGCTCGCGCGCAACCAGGCCCCGGTCTTCATCCAGGGCGAGTCCGGCACCGGCAAGGAAGTGATCGCGCGCCT
CATCCACGACCTCGGCCCGCGCGCGTCCGCCCCCTTCGTGCCGGTGAACTGCGGCGCGATCCCGCCCGAACTCATGGAAA
GCGAGTTTTTCGGCCACCGCAAGGGTGCCTTCACCGGCGCCGTGTTCGACAAGGACGGCCTCTTCCAGGCCGCGCGCGGC
GGCACCCTGTTCCTCGACGAGGTGGCCGACCTGCCGCTGGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAACGCGC
CGTGCGTCCCGTCGGCGCCCATGCCGAAGAATCCGTCGATGTGCGCATCCTCTCCGCGTCGCACCGCGACCTCGCCCAGC
TCGTGGCAGGCGGCAAGTTCCGCCAGGATCTCTATTTCCGCATCAACGTCATCACGCTGCGTGTGCCGCCGCTGCGCGAA
CGCCCGGAAGACATTCCCGAACTGGCCGTGCACATCCTCGCGCGACTCGCTGAGCGCGATGGCGTCCCGCCGCACCGCCT
CGCGCCCGACGCCGTCGCCGCCCTCAGGCAGCACTCCTTCCCCGGCAACGTCCGCGAACTCGAGAACCTGCTTGAACGCG
CGTGCGCGCTCTGCGACGGCGATGAGATCCGTGCCGGCGACATCGACCTGCATCCAACGGAAGGGATTGCCCAGGCCTTG
CTTCCGTTTTCCGCAGCCGACTCCTTTGCCGTGGAGACGGACGTCGAGCCCGGCGGGGATGGGGAGGACGAGCGCGTCCG
GATCCTGAGGATGCTCGACGAGACGCGCTGGAACCGTTCCGAGGCGGCGCGGCGCTTGGGAATGACGCTCAGGCAATTGC
GGTATCGGTTGCAGAAGTGGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (15-124)

• Sigma-54 interaction domain (Sigma54_activat) (147-313)

• Bacterial regulatory protein, Fis family (HTH_8) (424-460)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.491	96.76	0.585
pilR	Acinetobacter baumannii strain A118	49.351	99.784	0.492
luxO	Vibrio cholerae strain A1552	37.194	96.976	0.361