Detailed information NTG0470086

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H2R00_RS17925
• Genome accession: NZ_CP059494
• Coordinates: 3639737..3640894 (+)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus haynesii strain P19
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3634737..3645894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2R00_RS17900	-	3634825..3636006 (+)	1182	WP_182069982.1	glycosyltransferase family 1 protein	-
H2R00_RS17905	-	3636137..3637201 (+)	1065	WP_154999577.1	MraY family glycosyltransferase	-
H2R00_RS17910	-	3637331..3637705 (+)	375	WP_182069983.1	hypothetical protein	-
H2R00_RS17915	-	3637785..3638861 (-)	1077	WP_154999579.1	LCP family protein	-
H2R00_RS17920	-	3638876..3639514 (-)	639	WP_076788730.1	YigZ family protein	-
H2R00_RS17925	degS	3639737..3640894 (+)	1158	WP_003185733.1	histidine kinase	Regulator
H2R00_RS17930	degU	3640976..3641665 (+)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
H2R00_RS17935	-	3641785..3642627 (+)	843	WP_182069984.1	DegV family protein	-
H2R00_RS17940	comFA	3642751..3644145 (+)	1395	WP_182071113.1	DEAD/DEAH box helicase	Machinery gene
H2R00_RS17945	-	3644200..3644484 (+)	285	WP_182069985.1	late competence development ComFB family protein	-
H2R00_RS17950	comFC	3644441..3645175 (+)	735	WP_182069986.1	double zinc ribbon domain-containing protein	Machinery gene
H2R00_RS17955	-	3645234..3645653 (+)	420	WP_154999584.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=470086 H2R00_RS17925 WP_003185733.1 3639737..3640894(+) (degS) [Bacillus haynesii strain P19]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=470086 H2R00_RS17925 WP_003185733.1 3639737..3640894(+) (degS) [Bacillus haynesii strain P19]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTAGTCTTAAACTATTTAAATCAGGATCTGCGTCAGGTCGGTGTTCTCCTT
GAAGATGCGCAGGCCAAACAGGACTTCGGCCTGCGGATTATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTGGCAC
TATTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894