Detailed information NTG0046880

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: SAI6T6_RS08040
• Genome accession: NC_020536
• Coordinates: 1655848..1656450 (-)
• Length: 200 a.a.
• NCBI ID: WP_000271550.1
• Uniprot ID: P66748
• Organism: Staphylococcus aureus subsp. aureus ST228
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1650848..1661450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAI6T6_RS08020	yajC	1652344..1652604 (-)	261	WP_001160682.1	preprotein translocase subunit YajC	-
SAI6T6_RS08025 (SAI6T6_1011880)	tgt	1652623..1653762 (-)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
SAI6T6_RS08030 (SAI6T6_1011890)	queA	1653785..1654810 (-)	1026	WP_001019178.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
SAI6T6_RS08035 (SAI6T6_1011900)	ruvB	1654812..1655816 (-)	1005	WP_001005768.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SAI6T6_RS08040 (SAI6T6_1011910)	ruvA	1655848..1656450 (-)	603	WP_000271550.1	Holliday junction branch migration protein RuvA	Machinery gene
SAI6T6_RS08045	-	1656464..1656919 (-)	456	WP_000368902.1	ACT domain-containing protein	-
SAI6T6_RS08050 (SAI6T6_1011920)	obgE	1656932..1658224 (-)	1293	WP_000496100.1	GTPase ObgE	-
SAI6T6_RS08055	rpmA	1658578..1658862 (-)	285	WP_000916187.1	50S ribosomal protein L27	-
SAI6T6_RS08060	-	1658874..1659194 (-)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
SAI6T6_RS08065	rplU	1659200..1659508 (-)	309	WP_000457386.1	50S ribosomal protein L21	-
SAI6T6_RS08070 (SAI6T6_1011930)	mreD	1659744..1660274 (-)	531	WP_001259926.1	rod shape-determining protein MreD	-
SAI6T6_RS08075 (SAI6T6_1011940)	mreC	1660274..1661116 (-)	843	WP_000911041.1	rod shape-determining protein MreC	-
SAI6T6_RS14670	-	1661315..1661434 (-)	120	WP_000840602.1	hypothetical protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22281.50 Da
• Isoelectric Point: 6.1244

>NTDB_id=46880 SAI6T6_RS08040 WP_000271550.1 1655848..1656450(-) (ruvA) [Staphylococcus aureus subsp. aureus ST228]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=46880 SAI6T6_RS08040 WP_000271550.1 1655848..1656450(-) (ruvA) [Staphylococcus aureus subsp. aureus ST228]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCGTACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (156-197)

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA N terminal domain (RuvA_N) (1-61)

3D structure

• AlphaFold DB: P66748

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	43.216	99.5	0.43