Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | HTZ91_RS01650 | Genome accession | NZ_CP059155 |
| Coordinates | 379176..379679 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain WKZ-2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 375116..398696 | 379176..379679 | within | 0 |
Gene organization within MGE regions
Location: 375116..398696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTZ91_RS01620 (HTZ91_000324) | - | 375116..375961 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| HTZ91_RS01625 (HTZ91_000325) | - | 376115..376996 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| HTZ91_RS01630 (HTZ91_000326) | - | 377026..377229 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| HTZ91_RS01635 (HTZ91_000327) | ychF | 377241..378338 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| HTZ91_RS01640 (HTZ91_000328) | - | 378424..378615 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| HTZ91_RS01645 (HTZ91_000329) | rpsF | 378859..379155 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| HTZ91_RS01650 (HTZ91_000330) | ssbA | 379176..379679 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| HTZ91_RS01655 (HTZ91_000331) | rpsR | 379731..379973 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| HTZ91_RS01660 (HTZ91_000332) | - | 380205..381038 (-) | 834 | WP_180372434.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HTZ91_RS01665 (HTZ91_000333) | - | 381039..382253 (-) | 1215 | WP_123090135.1 | site-specific integrase | - |
| HTZ91_RS01670 (HTZ91_000334) | - | 382552..383286 (-) | 735 | WP_000142630.1 | helix-turn-helix domain-containing protein | - |
| HTZ91_RS01675 (HTZ91_000335) | - | 383436..383648 (+) | 213 | WP_053040300.1 | helix-turn-helix transcriptional regulator | - |
| HTZ91_RS01680 (HTZ91_000336) | - | 383649..383921 (+) | 273 | WP_053040301.1 | helix-turn-helix domain-containing protein | - |
| HTZ91_RS01685 (HTZ91_000337) | - | 383933..384079 (+) | 147 | WP_000784885.1 | hypothetical protein | - |
| HTZ91_RS01690 (HTZ91_000338) | tscA | 384072..384281 (+) | 210 | WP_001058492.1 | type II toxin-antitoxin system antitoxin TscA | - |
| HTZ91_RS01695 (HTZ91_000339) | tscT | 384284..384604 (+) | 321 | WP_123090134.1 | type II toxin-antitoxin system toxin TscT | - |
| HTZ91_RS01700 (HTZ91_000340) | - | 384668..385537 (+) | 870 | WP_053040303.1 | primase alpha helix C-terminal domain-containing protein | - |
| HTZ91_RS01705 (HTZ91_000341) | - | 385554..387023 (+) | 1470 | WP_180821714.1 | virulence-associated E family protein | - |
| HTZ91_RS01710 (HTZ91_000342) | - | 387302..387664 (+) | 363 | WP_001039165.1 | hypothetical protein | - |
| HTZ91_RS01715 (HTZ91_000343) | - | 387657..387929 (+) | 273 | WP_000477476.1 | hypothetical protein | - |
| HTZ91_RS01720 (HTZ91_000344) | - | 387931..388572 (+) | 642 | WP_160187057.1 | pathogenicity island protein | - |
| HTZ91_RS01725 (HTZ91_000345) | - | 389280..389624 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| HTZ91_RS01730 (HTZ91_000346) | - | 389655..390308 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| HTZ91_RS01735 (HTZ91_000347) | - | 390361..390888 (+) | 528 | WP_000771361.1 | spore coat protein | - |
| HTZ91_RS01740 (HTZ91_000348) | - | 391020..391232 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| HTZ91_RS01745 (HTZ91_000349) | - | 391229..391798 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| HTZ91_RS01750 (HTZ91_000350) | - | 392075..393043 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| HTZ91_RS01755 (HTZ91_000351) | - | 393185..393622 (+) | 438 | WP_073392942.1 | DUF3102 domain-containing protein | - |
| HTZ91_RS01760 (HTZ91_000352) | - | 393740..394252 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| HTZ91_RS14290 | - | 394268..394447 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| HTZ91_RS01765 (HTZ91_000353) | - | 395211..396218 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| HTZ91_RS01770 (HTZ91_000354) | - | 396224..396937 (-) | 714 | Protein_354 | tyrosine-type recombinase/integrase | - |
| HTZ91_RS01775 (HTZ91_000355) | - | 397174..397542 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| HTZ91_RS01780 (HTZ91_000356) | - | 397723..398295 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| HTZ91_RS01785 (HTZ91_000357) | - | 398433..398696 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=467402 HTZ91_RS01650 WP_000934799.1 379176..379679(+) (ssbA) [Staphylococcus aureus strain WKZ-2]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=467402 HTZ91_RS01650 WP_000934799.1 379176..379679(+) (ssbA) [Staphylococcus aureus strain WKZ-2]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |