Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   I6J32_RS07985 Genome accession   NZ_CP069437
Coordinates   1652975..1654204 (-) Length   409 a.a.
NCBI ID   WP_160002719.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1202     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1647975..1659204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J32_RS07970 (I6J32_07975) dnaK 1649431..1651353 (-) 1923 WP_204155168.1 molecular chaperone DnaK -
  I6J32_RS07975 (I6J32_07980) grpE 1651523..1652104 (-) 582 WP_204155169.1 nucleotide exchange factor GrpE -
  I6J32_RS07980 (I6J32_07985) - 1652320..1652925 (-) 606 WP_204155170.1 L-threonylcarbamoyladenylate synthase -
  I6J32_RS07985 (I6J32_07990) dprA 1652975..1654204 (-) 1230 WP_160002719.1 DNA-processing protein DprA Machinery gene
  I6J32_RS07990 (I6J32_07995) tsaP 1654374..1655477 (-) 1104 WP_204155171.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6J32_RS07995 (I6J32_08000) def 1655850..1656380 (+) 531 WP_135887808.1 peptide deformylase -
  I6J32_RS08000 (I6J32_08005) hisB 1656403..1657005 (+) 603 WP_007117432.1 imidazoleglycerol-phosphate dehydratase HisB -
  I6J32_RS08005 (I6J32_08010) - 1657099..1657587 (-) 489 WP_065263121.1 YajQ family cyclic di-GMP-binding protein -
  I6J32_RS08010 (I6J32_08015) - 1657867..1658613 (+) 747 WP_204155172.1 glutathione peroxidase -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 44635.15 Da        Isoelectric Point: 6.7455

>NTDB_id=466595 I6J32_RS07985 WP_160002719.1 1652975..1654204(-) (dprA) [Moraxella osloensis strain FDAARGOS_1202]
MQDYQPNLNPAQQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQFLHDTL
LELSQGQYGVVFDNDPLYPSQLKNIYDPPPLLLYQGNLSALSQPQLAIVGSRKPSPHAEKIAFDMAQYLAHEGLWITSGM
AEGIDKQAHLGALSLQMTGTQGGTIAVLGNGIKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLS
LATLVVEAAAKSGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPLVKAAEVEPA
PIVAQSVISSPQLPSESASNTQPHQAPLAMDVAPHLQTLLNQLDWVGQDLDNLVDKTRTDIATLMGWLIELELMGLVMQR
GGLYMRCRP

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=466595 I6J32_RS07985 WP_160002719.1 1652975..1654204(-) (dprA) [Moraxella osloensis strain FDAARGOS_1202]
ATGCAGGATTATCAGCCTAACTTAAACCCGGCGCAGCAGGCTGCCTTATTGTTATGGCATTTAGTGAACTTATCGGTGCC
GGTTTATAACAAGCTTGTAGCGCGTTTTGGTAGCGCTGAACAAGCCATTCAAGCCAAGCTGGCAGACTGGCAAGCGCTGG
GCTTGCATGATAATCACCACAAACGTTTTGCTGAGTTTATCAGCGCCAGTCGAACCAGCCAGTTTTTGCATGATACGCTA
TTAGAACTATCACAAGGGCAGTATGGAGTGGTGTTTGATAATGATCCTTTATATCCGTCGCAGTTAAAAAACATCTATGA
CCCACCCCCTTTGCTATTGTATCAAGGCAACTTATCTGCCTTAAGCCAACCACAATTGGCGATCGTTGGAAGTCGTAAAC
CTAGCCCGCATGCCGAAAAAATTGCCTTTGATATGGCGCAATATTTGGCGCACGAAGGCTTATGGATCACCAGTGGCATG
GCAGAAGGCATTGACAAACAAGCGCATTTAGGTGCGTTAAGTCTACAGATGACGGGTACACAAGGTGGTACTATTGCGGT
ACTGGGCAATGGTATTAAACATTGTTATCCAAAAAATCACGCCAGTCTTAAAGCCCATATTATTGCGTCAGGTGGCTGCG
TCATTAGTGAATTATTGCCCGATATGCCGAGCAATCGTTACCATTTTCCAAGGCGCAATCGTCTCGTCGCTGGGCTAAGT
TTGGCAACTTTGGTTGTAGAAGCCGCTGCAAAAAGCGGCTCGCTCATCACGGCCAGAGAAGCCAACGAGCAAGGCAAACA
AGTTTTTGCTATTCCTAGTCATATTGACAACCTCAACGCCAAAGGTTGCCACCAATTGATTCGTGAGGGTGCGACCTTAG
TCGATCATCCATCACAAATTTTGGAAGATTTATCAATTTTTAAATCGCCGCTTGTCAAAGCCGCTGAGGTTGAACCAGCG
CCAATAGTTGCACAGTCAGTCATCAGTAGCCCTCAATTACCGTCCGAATCAGCATCAAATACCCAGCCGCACCAAGCGCC
ATTGGCGATGGATGTGGCGCCGCATTTGCAGACACTACTTAATCAACTCGATTGGGTAGGGCAAGATTTAGACAACTTGG
TCGATAAAACCCGTACCGATATTGCGACACTTATGGGCTGGCTGATTGAGCTTGAGCTAATGGGACTGGTGATGCAGCGC
GGCGGTCTATATATGCGCTGCCGCCCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

44.03

98.289

0.433

  dprA Acinetobacter baylyi ADP1

45.153

95.844

0.433

  dprA Acinetobacter baumannii D1279779

44.557

96.577

0.43