Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6J32_RS07990 Genome accession   NZ_CP069437
Coordinates   1654374..1655477 (-) Length   367 a.a.
NCBI ID   WP_204155171.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1202     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1649374..1660477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J32_RS07970 (I6J32_07975) dnaK 1649431..1651353 (-) 1923 WP_204155168.1 molecular chaperone DnaK -
  I6J32_RS07975 (I6J32_07980) grpE 1651523..1652104 (-) 582 WP_204155169.1 nucleotide exchange factor GrpE -
  I6J32_RS07980 (I6J32_07985) - 1652320..1652925 (-) 606 WP_204155170.1 L-threonylcarbamoyladenylate synthase -
  I6J32_RS07985 (I6J32_07990) dprA 1652975..1654204 (-) 1230 WP_160002719.1 DNA-processing protein DprA Machinery gene
  I6J32_RS07990 (I6J32_07995) tsaP 1654374..1655477 (-) 1104 WP_204155171.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6J32_RS07995 (I6J32_08000) def 1655850..1656380 (+) 531 WP_135887808.1 peptide deformylase -
  I6J32_RS08000 (I6J32_08005) hisB 1656403..1657005 (+) 603 WP_007117432.1 imidazoleglycerol-phosphate dehydratase HisB -
  I6J32_RS08005 (I6J32_08010) - 1657099..1657587 (-) 489 WP_065263121.1 YajQ family cyclic di-GMP-binding protein -
  I6J32_RS08010 (I6J32_08015) - 1657867..1658613 (+) 747 WP_204155172.1 glutathione peroxidase -
  I6J32_RS08015 (I6J32_08020) - 1658718..1659710 (+) 993 WP_204155173.1 IS5-like element ISAba23 family transposase -

Sequence


Protein


Download         Length: 367 a.a.        Molecular weight: 39492.46 Da        Isoelectric Point: 9.2158

>NTDB_id=466596 I6J32_RS07990 WP_204155171.1 1654374..1655477(-) (tsaP) [Moraxella osloensis strain FDAARGOS_1202]
MTNYNTTTMKKLSFALLATLGMTVTSVAAANNPPPRIKADAPNRYVVKKGDTLWDISGKFLESPWRWKEIWATNKHIRNP
HLIYPKDVIILCVIKGQKLVGVDTGEGCAGVEKAMSAPVTTTTVVSAAGSIAAIPLTAIETWLERNIIVSPDDFKTTPYV
LASKDKNIITGVGNKIYAKGVPLIVGQRYGVYREGEPYVDPVTRKVIGLEVTQVAAGIVTSVASNGVSSIELKKSYGQEV
REGDRVFVEVGQYLPPAFYPKPASVTRGGRVIRILNSISSAGRDGVIAINLGTSQGAEPGDVLTVYQKGALVLDDYSSVK
GGAVRLPSEQIGHVMVFKAFNDISYAYVLDAESPIHEQDFLLPAVGN

Nucleotide


Download         Length: 1104 bp        

>NTDB_id=466596 I6J32_RS07990 WP_204155171.1 1654374..1655477(-) (tsaP) [Moraxella osloensis strain FDAARGOS_1202]
ATGACAAACTATAACACCACGACAATGAAAAAATTATCCTTCGCTTTGTTGGCAACCTTAGGTATGACAGTGACTTCAGT
GGCTGCTGCTAACAACCCGCCGCCTCGTATCAAAGCCGATGCGCCCAACCGTTATGTGGTAAAAAAAGGTGATACGCTTT
GGGATATCTCCGGCAAATTCTTAGAAAGTCCGTGGCGCTGGAAAGAAATTTGGGCGACCAATAAGCATATTCGTAATCCG
CATCTGATTTATCCAAAAGATGTGATTATCTTATGTGTGATTAAAGGGCAAAAATTGGTCGGTGTAGATACGGGTGAAGG
CTGTGCAGGCGTTGAAAAAGCCATGAGCGCGCCAGTCACCACAACCACAGTGGTAAGTGCCGCAGGTAGCATCGCTGCGA
TTCCTTTGACTGCCATTGAAACATGGCTTGAGCGCAATATCATCGTATCGCCTGATGACTTTAAAACTACCCCCTATGTG
CTTGCTTCAAAAGATAAAAACATTATCACAGGTGTCGGCAACAAAATCTATGCCAAAGGCGTGCCACTCATTGTGGGACA
ACGCTATGGCGTGTACCGTGAGGGCGAACCGTATGTTGACCCAGTGACCCGTAAAGTCATCGGTCTTGAAGTCACCCAAG
TTGCCGCAGGTATCGTCACTAGCGTAGCATCAAACGGTGTTTCTAGTATCGAGCTTAAAAAATCGTATGGTCAAGAAGTG
CGCGAAGGTGACCGTGTATTTGTCGAAGTCGGTCAGTACTTGCCACCCGCTTTTTATCCAAAACCTGCCAGCGTTACTCG
TGGCGGTCGCGTGATTCGTATTTTAAATTCCATTAGTAGTGCGGGTCGAGATGGGGTGATTGCCATTAATTTGGGTACCA
GCCAAGGCGCTGAGCCAGGCGATGTGTTGACGGTTTATCAAAAAGGCGCTTTAGTGTTGGACGACTATTCATCCGTGAAA
GGTGGGGCAGTACGATTGCCAAGTGAGCAAATCGGTCATGTCATGGTATTTAAAGCATTTAACGATATTAGCTACGCTTA
TGTACTCGATGCAGAATCACCGATTCATGAGCAAGATTTTTTATTGCCTGCGGTCGGCAACTAA

Domains


Predicted by InterProScan.

(45-90)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

42.12

100

0.422