Detailed information    

insolico Bioinformatically predicted

Overview

Name   ideA   Type   Regulator
Locus tag   JSW75_RS15905 Genome accession   NZ_CP069386
Coordinates   3311608..3312282 (-) Length   224 a.a.
NCBI ID   WP_048608563.1    Uniprot ID   A0A0M0HVE7
Organism   Escherichia coli strain XH1815     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 3306608..3317282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JSW75_RS15895 (JSW75_15805) - 3307745..3309163 (+) 1419 WP_004249371.1 SIR2 family protein -
  JSW75_RS15900 (JSW75_15810) - 3309160..3311199 (+) 2040 WP_004249372.1 ATP-binding protein -
  JSW75_RS15905 (JSW75_15815) ideA 3311608..3312282 (-) 675 WP_048608563.1 endonuclease Regulator
  JSW75_RS15910 (JSW75_15820) - 3312324..3313611 (-) 1288 Protein_3122 ISL3 family transposase -
  JSW75_RS15915 (JSW75_15825) lspA 3313633..3314144 (-) 512 Protein_3123 signal peptidase II -
  JSW75_RS15920 (JSW75_15830) - 3314148..3315044 (-) 897 WP_053409936.1 cation transporter -
  JSW75_RS15925 (JSW75_15835) cadR 3315140..3315547 (+) 408 WP_053409935.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
  JSW75_RS15930 (JSW75_15840) - 3316011..3316280 (-) 270 Protein_3126 hypothetical protein -
  JSW75_RS23230 - 3316292..3316483 (-) 192 WP_009873362.1 hypothetical protein -
  JSW75_RS15940 (JSW75_15850) - 3316488..3316826 (-) 339 WP_002310911.1 hypothetical protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26077.09 Da        Isoelectric Point: 7.2404

>NTDB_id=466434 JSW75_RS15905 WP_048608563.1 3311608..3312282(-) (ideA) [Escherichia coli strain XH1815]
MKSVYPFFIALFAIPAIAEHPTSFSQAKRFAREIYQDNQSTFYCGCSYSNDGAIDAASCGYEPRKQPKRGERLEWEHVVS
AWEIGHQRQCWQNGGRRNCEKNDPEFSKMVSDLHNLVPSVGELNGDRSNFRFGMIPNEPRSYGQCDFEVDFKDRRAEPPA
NRQGDIARIYFYMRDQYGLRLSRQQTQLFEAWSRMDPVDEWEKVRDFKIKTIQGNSNCHVSNSC

Nucleotide


Download         Length: 675 bp        

>NTDB_id=466434 JSW75_RS15905 WP_048608563.1 3311608..3312282(-) (ideA) [Escherichia coli strain XH1815]
ATTAAATCCGTATACCCTTTCTTTATAGCGTTATTCGCTATACCTGCAATTGCAGAACACCCCACATCGTTCAGTCAGGC
AAAACGATTTGCCCGAGAAATTTACCAAGACAACCAGAGTACGTTTTACTGTGGATGTAGCTATAGCAATGATGGTGCGA
TTGATGCTGCATCTTGCGGATATGAACCAAGAAAGCAACCGAAACGAGGTGAACGCTTAGAGTGGGAACATGTAGTCTCA
GCTTGGGAAATTGGCCATCAACGCCAATGCTGGCAAAATGGTGGTCGTCGGAACTGCGAAAAGAATGATCCTGAGTTTTC
TAAAATGGTTTCGGATCTCCATAACCTCGTACCATCTGTAGGAGAGCTCAATGGGGATAGGTCAAATTTTCGATTTGGCA
TGATTCCGAATGAACCAAGATCCTATGGTCAATGTGATTTCGAAGTTGATTTCAAAGACCGTCGAGCAGAACCACCAGCT
AACCGTCAGGGTGATATTGCTAGAATTTATTTCTACATGCGAGATCAATACGGCCTAAGACTCAGTAGGCAACAAACTCA
GCTATTTGAAGCTTGGTCAAGAATGGACCCTGTTGACGAATGGGAAAAAGTGCGTGATTTTAAGATTAAAACTATTCAAG
GTAACTCTAACTGCCATGTGTCAAATAGCTGTTAA

Domains

Predicted by InterProScan.

Endonuclease I (Endonuclease_1)

(50-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M0HVE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ideA Vibrio cholerae O1 str. 2010EL-1786

92.76

98.661

0.915
  dns Vibrio parahaemolyticus RIMD 2210633

52.381

100

0.54
  dns Aliivibrio fischeri ES114

52.423

100

0.531
  dns Vibrio cholerae strain A1552

50.661

100

0.513
  dns Campylobacter jejuni RM1221

37.674

95.982

0.362