Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ECTR2_RS09885 | Genome accession | NC_017343 |
| Coordinates | 1981997..1982467 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus subsp. aureus ECT-R | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1951679..2006832 | 1981997..1982467 | within | 0 |
Gene organization within MGE regions
Location: 1951679..2006832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTR2_RS09675 (ECTR2_1814) | scn | 1951679..1952029 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| ECTR2_RS09680 (ECTR2_1815) | - | 1952712..1953161 (+) | 450 | WP_000727645.1 | chemotaxis-inhibiting protein CHIPS | - |
| ECTR2_RS09685 | - | 1953256..1953593 (-) | 338 | Protein_1835 | SH3 domain-containing protein | - |
| ECTR2_RS09690 (ECTR2_1817) | sak | 1954237..1954728 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| ECTR2_RS09695 (ECTR2_1818) | - | 1954919..1955674 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| ECTR2_RS09700 (ECTR2_1819) | - | 1955686..1955940 (-) | 255 | WP_000611512.1 | phage holin | - |
| ECTR2_RS09705 | - | 1955992..1956099 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| ECTR2_RS14325 (ECTR2_1820) | pepG1 | 1956152..1956286 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ECTR2_RS09715 (ECTR2_1821) | sep | 1956531..1957313 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| ECTR2_RS09720 (ECTR2_1822) | - | 1957725..1958099 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| ECTR2_RS09725 (ECTR2_1823) | - | 1958155..1958442 (-) | 288 | WP_001262621.1 | hypothetical protein | - |
| ECTR2_RS09730 (ECTR2_1824) | - | 1958488..1958640 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| ECTR2_RS09735 (ECTR2_1825) | - | 1958633..1962415 (-) | 3783 | WP_000582152.1 | phage tail spike protein | - |
| ECTR2_RS09740 (ECTR2_1826) | - | 1962431..1963915 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ECTR2_RS09745 (ECTR2_1827) | - | 1963912..1968441 (-) | 4530 | WP_000504567.1 | phage tail tape measure protein | - |
| ECTR2_RS15100 (ECTR2_1828) | gpGT | 1968498..1968635 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ECTR2_RS09755 (ECTR2_1829) | gpG | 1968686..1969036 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ECTR2_RS14330 (ECTR2_1830) | - | 1969086..1969316 (-) | 231 | Protein_1850 | Ig-like domain-containing protein | - |
| ECTR2_RS09760 (ECTR2_1831) | - | 1969352..1969996 (-) | 645 | WP_000268740.1 | major tail protein | - |
| ECTR2_RS09765 (ECTR2_1832) | - | 1969997..1970404 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ECTR2_RS09770 (ECTR2_1833) | - | 1970401..1970805 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| ECTR2_RS09775 (ECTR2_1834) | - | 1970802..1971164 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ECTR2_RS09780 (ECTR2_1835) | - | 1971148..1971432 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ECTR2_RS09785 (ECTR2_1836) | - | 1971422..1971706 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| ECTR2_RS09790 (ECTR2_1837) | - | 1971726..1972871 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| ECTR2_RS09795 (ECTR2_1838) | - | 1972895..1973632 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| ECTR2_RS09800 (ECTR2_1839) | - | 1973616..1974803 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ECTR2_RS09805 (ECTR2_1840) | - | 1974819..1976480 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ECTR2_RS09810 (ECTR2_1841) | - | 1976477..1976821 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ECTR2_RS09815 (ECTR2_1842) | - | 1976951..1977250 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ECTR2_RS09820 (ECTR2_1843) | - | 1977482..1977898 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ECTR2_RS09825 (ECTR2_1844) | - | 1977926..1978126 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ECTR2_RS09830 (ECTR2_1845) | rinB | 1978126..1978275 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ECTR2_RS09835 (ECTR2_1846) | - | 1978272..1978478 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ECTR2_RS09840 (ECTR2_1847) | - | 1978475..1978720 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ECTR2_RS09845 (ECTR2_1848) | - | 1978757..1979293 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ECTR2_RS09850 (ECTR2_1849) | - | 1979290..1979535 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ECTR2_RS09855 (ECTR2_1850) | - | 1979550..1979792 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ECTR2_RS09860 (ECTR2_1851) | - | 1979795..1980052 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ECTR2_RS09865 (ECTR2_1852) | - | 1980052..1980423 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ECTR2_RS09870 (ECTR2_1853) | - | 1980436..1980840 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECTR2_RS09875 (ECTR2_1854) | - | 1980849..1981067 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ECTR2_RS09880 (ECTR2_1855) | - | 1981074..1981967 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ECTR2_RS09885 (ECTR2_1856) | ssbA | 1981997..1982467 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ECTR2_RS09890 (ECTR2_1857) | - | 1982468..1983085 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ECTR2_RS09895 (ECTR2_1858) | - | 1983166..1984086 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ECTR2_RS09900 (ECTR2_1859) | - | 1984088..1986031 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ECTR2_RS14335 | - | 1986040..1986303 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ECTR2_RS09905 (ECTR2_1860) | - | 1986312..1986572 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ECTR2_RS09910 (ECTR2_1861) | - | 1986577..1986879 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ECTR2_RS09915 | - | 1986974..1987135 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ECTR2_RS09920 (ECTR2_1862) | - | 1987132..1987455 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ECTR2_RS09925 (ECTR2_1864) | - | 1987510..1987890 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ECTR2_RS09930 (ECTR2_1863) | - | 1987877..1988074 (-) | 198 | WP_001148856.1 | hypothetical protein | - |
| ECTR2_RS09935 (ECTR2_1865) | - | 1988090..1988842 (-) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| ECTR2_RS09940 (ECTR2_1866) | - | 1988893..1989222 (+) | 330 | WP_000128909.1 | hypothetical protein | - |
| ECTR2_RS09945 | - | 1989211..1989426 (-) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| ECTR2_RS09950 (ECTR2_1867) | - | 1989442..1989705 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| ECTR2_RS09955 | - | 1989702..1989876 (-) | 175 | Protein_1891 | transcriptional regulator | - |
| ECTR2_RS09960 (ECTR2_1868) | - | 1989839..1990552 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ECTR2_RS09965 (ECTR2_1869) | - | 1990568..1991500 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ECTR2_RS09970 (ECTR2_1870) | - | 1991506..1991847 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ECTR2_RS09975 (ECTR2_1871) | - | 1992051..1992233 (+) | 183 | WP_000694772.1 | hypothetical protein | - |
| ECTR2_RS09980 (ECTR2_1872) | - | 1992333..1993316 (+) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| ECTR2_RS09985 (ECTR2_1873) | - | 1993327..1993569 (+) | 243 | WP_000427213.1 | hypothetical protein | - |
| ECTR2_RS09990 (ECTR2_1874) | - | 1993632..1994669 (+) | 1038 | WP_000857180.1 | tyrosine-type recombinase/integrase | - |
| ECTR2_RS09995 (ECTR2_1875) | sph | 1994726..1995550 (+) | 825 | Protein_1899 | sphingomyelin phosphodiesterase | - |
| ECTR2_RS10000 (ECTR2_1876) | lukG | 1995788..1996804 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ECTR2_RS10005 (ECTR2_1877) | lukH | 1996826..1997881 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ECTR2_RS10010 (ECTR2_1878) | - | 1998317..1999540 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ECTR2_RS10015 (ECTR2_1879) | - | 1999984..2001291 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ECTR2_RS10020 (ECTR2_1880) | groL | 2001831..2003447 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ECTR2_RS10025 (ECTR2_1881) | groES | 2003523..2003807 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ECTR2_RS10030 (ECTR2_1882) | mroQ | 2003982..2004725 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ECTR2_RS10035 (ECTR2_1883) | - | 2004750..2006009 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| ECTR2_RS10040 (ECTR2_1884) | - | 2006206..2006832 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=46528 ECTR2_RS09885 WP_000934759.1 1981997..1982467(-) (ssbA) [Staphylococcus aureus subsp. aureus ECT-R]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=46528 ECTR2_RS09885 WP_000934759.1 1981997..1982467(-) (ssbA) [Staphylococcus aureus subsp. aureus ECT-R]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |