Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | B18_RS13440 | Genome accession | NZ_CP058332 |
| Coordinates | 2920294..2920830 (+) | Length | 178 a.a. |
| NCBI ID | WP_025921208.1 | Uniprot ID | Q8KQ36 |
| Organism | Pseudomonas aeruginosa strain B18 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2915294..2925830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B18_RS13415 (B18_13395) | yacG | 2915463..2915663 (-) | 201 | WP_017148551.1 | DNA gyrase inhibitor YacG | - |
| B18_RS13420 (B18_13400) | coaE | 2915660..2916271 (-) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| B18_RS13425 (B18_13405) | pilD | 2916268..2917140 (-) | 873 | WP_017148550.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| B18_RS13430 (B18_13410) | pilC | 2917143..2918360 (-) | 1218 | WP_023103506.1 | type II secretion system F family protein | Machinery gene |
| B18_RS13435 (B18_13415) | pilB | 2918364..2920067 (-) | 1704 | WP_023100230.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| B18_RS13440 | pilE | 2920294..2920830 (+) | 537 | WP_025921208.1 | pilin | Machinery gene |
| B18_RS13445 (B18_13420) | tfpZ | 2920895..2921632 (+) | 738 | WP_023110409.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| B18_RS13455 (B18_13430) | - | 2921944..2922186 (-) | 243 | WP_023109353.1 | hypothetical protein | - |
| B18_RS13460 (B18_13435) | - | 2924365..2925513 (+) | 1149 | WP_172773772.1 | DUF6531 domain-containing protein | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18322.83 Da Isoelectric Point: 4.9984
>NTDB_id=463859 B18_RS13440 WP_025921208.1 2920294..2920830(+) (pilE) [Pseudomonas aeruginosa strain B18]
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITITYVADQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITITYVADQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
Nucleotide
Download Length: 537 bp
>NTDB_id=463859 B18_RS13440 WP_025921208.1 2920294..2920830(+) (pilE) [Pseudomonas aeruginosa strain B18]
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTACGTATGTCGCTGACCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTACGTATGTCGCTGACCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
43.719 |
100 |
0.489 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.556 |
100 |
0.41 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.341 |
98.876 |
0.399 |
| pilA2 | Legionella pneumophila str. Paris |
39.773 |
98.876 |
0.393 |