Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   HW271_RS02085 Genome accession   NZ_CP058258
Coordinates   423375..424037 (-) Length   220 a.a.
NCBI ID   WP_178894662.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418375..429037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS02055 (HW271_02055) - 418499..419065 (+) 567 WP_178894656.1 aminodeoxychorismate/anthranilate synthase component II -
  HW271_RS02060 (HW271_02060) trpD 419076..420080 (+) 1005 WP_178894657.1 anthranilate phosphoribosyltransferase -
  HW271_RS02065 (HW271_02065) trpC 420077..420844 (+) 768 WP_178894658.1 indole-3-glycerol phosphate synthase TrpC -
  HW271_RS02070 (HW271_02070) - 420831..421430 (+) 600 WP_178894659.1 phosphoribosylanthranilate isomerase -
  HW271_RS02075 (HW271_02075) trpB 421408..422631 (+) 1224 WP_178894660.1 tryptophan synthase subunit beta -
  HW271_RS02080 (HW271_02080) trpA 422624..423406 (+) 783 WP_178894661.1 tryptophan synthase subunit alpha -
  HW271_RS02085 (HW271_02085) cclA/cilC 423375..424037 (-) 663 WP_178894662.1 A24 family peptidase Machinery gene
  HW271_RS02090 (HW271_02090) - 424108..424563 (+) 456 WP_178894663.1 N-acetyltransferase -
  HW271_RS02095 (HW271_02095) truA 424649..425398 (+) 750 WP_178894664.1 tRNA pseudouridine(38-40) synthase TruA -
  HW271_RS02100 (HW271_02100) - 425388..426161 (+) 774 WP_178894665.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  HW271_RS02105 (HW271_02105) - 426139..426600 (+) 462 WP_178894666.1 ECF transporter S component -
  HW271_RS02110 (HW271_02110) - 426659..426883 (+) 225 WP_178894667.1 YqgQ family protein -
  HW271_RS02115 (HW271_02115) - 426889..427269 (+) 381 WP_006149793.1 rhodanese-like domain-containing protein -
  HW271_RS02120 (HW271_02120) - 427360..427587 (+) 228 WP_006149827.1 hypothetical protein -
  HW271_RS02125 (HW271_02125) - 427784..428011 (+) 228 WP_178894668.1 DUF4190 domain-containing protein -
  HW271_RS02130 (HW271_02130) - 428202..428447 (+) 246 WP_178894669.1 hypothetical protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25202.51 Da        Isoelectric Point: 8.0948

>NTDB_id=463208 HW271_RS02085 WP_178894662.1 423375..424037(-) (cclA/cilC) [Streptococcus sp. oral taxon 061 strain F0704]
MIHLYFFLVGTILASFLGLVIDRFPEQSIVFPASHCDSCQTRLRPLDLIPIVSQIFNRFRCRYCKVRYPFWYAFFELGSG
LFFLAFSWEFLTLNQVILITAGLTLGIYDLRHQEYPLLVWLTFHLVLMVCCGWNLIMAFFLVLGIISHVIDIRIGAGDFL
FLASCALVFTLTELLILIQFASTTGILAFLLLKKKERLPFVPFLLLATCVIIFGKLLLLG

Nucleotide


Download         Length: 663 bp        

>NTDB_id=463208 HW271_RS02085 WP_178894662.1 423375..424037(-) (cclA/cilC) [Streptococcus sp. oral taxon 061 strain F0704]
ATGATTCATCTTTACTTTTTTCTTGTTGGAACGATTCTTGCTTCCTTTCTAGGCTTGGTCATTGATCGCTTCCCTGAACA
ATCCATCGTCTTTCCTGCTAGTCACTGTGATTCTTGTCAGACTCGCTTGAGACCACTAGATTTGATTCCGATTGTGTCCC
AGATATTCAATCGCTTTCGCTGTCGCTATTGCAAGGTACGATATCCTTTCTGGTATGCTTTCTTTGAGTTAGGCTCGGGA
CTGTTCTTTTTAGCTTTTTCTTGGGAATTTCTAACCTTGAATCAAGTCATCCTAATCACTGCTGGCTTAACTTTAGGAAT
TTATGACCTTCGTCATCAAGAATATCCCTTGCTAGTCTGGCTGACTTTCCACCTAGTCCTCATGGTATGCTGTGGTTGGA
ATCTAATCATGGCTTTCTTCCTAGTTCTTGGAATCATTTCCCATGTTATTGATATTCGCATTGGGGCAGGTGATTTTCTT
TTTCTGGCCTCTTGTGCACTCGTATTTACACTTACAGAACTTCTAATTTTAATTCAATTTGCTTCCACTACTGGCATTCT
AGCCTTTCTCCTACTAAAGAAAAAGGAAAGACTTCCTTTTGTGCCCTTCCTCTTGCTTGCTACTTGTGTGATTATTTTTG
GGAAGCTACTGCTTCTCGGATAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

82.648

99.545

0.823
  cclA/cilC Streptococcus mitis NCTC 12261

82.648

99.545

0.823
  cclA/cilC Streptococcus pneumoniae Rx1

82.192

99.545

0.818
  cclA/cilC Streptococcus pneumoniae D39

82.192

99.545

0.818
  cclA/cilC Streptococcus pneumoniae R6

82.192

99.545

0.818
  cclA/cilC Streptococcus pneumoniae TIGR4

79.909

99.545

0.795