Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   HW271_RS01680 Genome accession   NZ_CP058258
Coordinates   357068..359035 (+) Length   655 a.a.
NCBI ID   WP_178894611.1    Uniprot ID   A0A7H8Z644
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 352068..364035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS01670 (HW271_01670) - 353656..355140 (-) 1485 WP_178894609.1 DUF1846 domain-containing protein -
  HW271_RS01675 (HW271_01675) - 355290..356900 (+) 1611 WP_178894610.1 alpha-glucosidase -
  HW271_RS01680 (HW271_01680) amiA 357068..359035 (+) 1968 WP_178894611.1 peptide ABC transporter substrate-binding protein Regulator
  HW271_RS01685 (HW271_01685) amiA3 359197..361155 (+) 1959 WP_178894612.1 peptide ABC transporter substrate-binding protein Regulator
  HW271_RS01690 (HW271_01690) - 361351..362799 (+) 1449 WP_178894613.1 LCP family protein -
  HW271_RS01695 (HW271_01695) cps4B 362801..363532 (+) 732 WP_178894614.1 capsular polysaccharide biosynthesis protein Cps4B -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72503.13 Da        Isoelectric Point: 5.0045

>NTDB_id=463206 HW271_RS01680 WP_178894611.1 357068..359035(+) (amiA) [Streptococcus sp. oral taxon 061 strain F0704]
MKSKKLLAVAGITMSAALLLAACGKTEKKADAPTTFSYVYAIDPSTLDYSVTSKSSTSDVIANLVDGLLENDKYGNLIPS
LAEDWSVSQDGLTYTYKLRKGVKWYTSEGEEYAEVKAQDFVTGLKHAADGKSDGLTLIQDSIKGLAEYVSGETNDFSTVG
VKAVDDYTVEYTLNKPESFWNSKVTTATMLPVNEEFLNSQGKDYGAATPSGILYNGPYILKNFTSKSVIEYEKNPNYWDK
DNVKIDHVKLTFYDGSDQESLIRSFASGSYTTARLFPTSSSFDSTKKEYGDKIVYSPQEATSYYFTFNVNRQSYNKTAKT
DEAQKTSTKEALLNKNFRQAINFALDRHSYSAQMNGEEGADKIIRTSLVPYDYVQVGEKTFGELAQEQLVTYGDQWKDVA
LTDGKDTLYNPTKAKAAFEKAKLELQAKGVTFPIHLDIPVEQTDVIAVQQTNSLKQSVEAALGTENVVIDVLQMTDNEKM
SITSQAKVPSQKDYDLNGTGWGPDYQDPATYLNILDAKKGSALKHLGITKGKDPEVMAQVGLDEYKKLLDDAASETTDLN
KRYEKYAKAQAWVSDSSLLIPVASSGGSPTVSRTVPFSKAYSQVGIKGDPFVFKGLELQNDIVTTKEYEEALKKWQKEKL
ETNAKYQKELANHVK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=463206 HW271_RS01680 WP_178894611.1 357068..359035(+) (amiA) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAAATCGAAAAAGTTGCTCGCAGTAGCAGGGATAACGATGAGTGCAGCTCTTCTTTTGGCAGCTTGTGGAAAGACAGA
GAAAAAAGCAGATGCTCCTACAACATTTTCATACGTATATGCCATCGATCCATCAACATTGGACTATAGCGTTACTAGTA
AAAGTTCAACATCGGACGTCATCGCTAACTTGGTCGACGGACTCTTGGAAAATGACAAATACGGAAACTTGATTCCATCT
CTTGCTGAAGACTGGTCGGTTTCACAAGACGGTTTGACCTACACTTACAAACTACGTAAAGGTGTCAAATGGTATACTTC
TGAAGGTGAGGAGTACGCTGAGGTCAAGGCTCAAGACTTTGTGACTGGTTTGAAGCATGCTGCTGATGGTAAGTCAGATG
GTCTAACTCTTATCCAAGATTCTATCAAAGGTTTGGCAGAATACGTTAGCGGTGAAACGAATGACTTCTCAACAGTCGGT
GTCAAAGCAGTTGATGACTATACGGTTGAGTATACCTTGAACAAACCAGAAAGCTTTTGGAATTCTAAGGTAACAACAGC
GACTATGCTCCCAGTTAATGAAGAATTCCTAAACTCTCAAGGTAAAGATTATGGTGCAGCTACACCTTCAGGTATTCTCT
ACAACGGTCCATATATTTTGAAGAACTTCACTTCAAAATCAGTGATTGAGTACGAAAAGAATCCAAACTACTGGGACAAG
GACAATGTTAAGATTGACCACGTCAAATTGACTTTCTACGACGGTTCTGACCAAGAATCATTGATCCGTAGCTTTGCATC
AGGTTCCTATACAACAGCTCGCCTCTTCCCAACTAGTTCAAGTTTTGACTCAACTAAGAAAGAATACGGCGATAAGATTG
TTTATAGTCCTCAAGAAGCGACAAGCTATTACTTTACTTTCAACGTAAATCGTCAGTCTTATAATAAAACAGCGAAGACA
GATGAAGCACAAAAAACTTCAACTAAAGAAGCACTTCTCAATAAAAACTTCCGCCAGGCAATCAACTTTGCTCTTGACCG
TCATTCTTATTCTGCTCAGATGAATGGTGAAGAAGGAGCGGACAAGATTATCCGTACCAGTCTTGTACCTTATGACTATG
TTCAGGTCGGTGAAAAGACTTTCGGTGAATTGGCTCAAGAACAATTGGTAACATACGGAGACCAGTGGAAAGATGTAGCT
TTGACAGATGGTAAAGACACTCTTTACAATCCAACAAAAGCAAAAGCTGCCTTTGAAAAAGCAAAATTAGAATTGCAAGC
TAAAGGTGTAACCTTCCCAATCCATTTGGATATTCCAGTTGAACAGACAGATGTCATTGCTGTTCAACAAACCAATTCCC
TCAAACAATCTGTCGAAGCAGCGCTTGGAACTGAAAATGTTGTCATCGATGTCCTTCAAATGACAGATAATGAGAAAATG
AGTATTACATCTCAAGCTAAGGTTCCTTCTCAAAAAGACTATGACTTGAATGGAACTGGTTGGGGACCAGACTATCAAGA
TCCAGCTACCTATCTAAATATCTTGGATGCTAAGAAAGGTTCTGCCCTTAAACACTTGGGTATCACAAAAGGTAAAGATC
CAGAAGTCATGGCTCAAGTTGGACTTGATGAGTACAAGAAACTCTTGGATGATGCAGCATCAGAAACAACCGACCTTAAC
AAACGCTATGAAAAATATGCTAAAGCACAGGCTTGGGTATCTGATAGTTCACTTCTCATTCCTGTAGCATCTTCAGGAGG
TTCTCCTACAGTTAGTCGTACAGTACCATTTTCGAAAGCCTACTCTCAAGTTGGGATCAAGGGAGATCCGTTTGTATTTA
AAGGTTTAGAGTTGCAAAATGATATTGTAACCACTAAAGAATACGAAGAAGCTCTTAAGAAATGGCAAAAAGAGAAACTT
GAAACAAACGCTAAATATCAAAAAGAGTTAGCCAACCACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8Z644

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

54.407

100

0.547
  amiA3 Streptococcus thermophilus LMD-9

52.959

100

0.533
  amiA3 Streptococcus thermophilus LMG 18311

52.504

100

0.528