Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | LILO_RS11340 | Genome accession | NC_020450 |
| Coordinates | 2351287..2351880 (-) | Length | 197 a.a. |
| NCBI ID | WP_003131995.1 | Uniprot ID | Q9CDL2 |
| Organism | Lactococcus lactis subsp. lactis IO-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2346287..2356880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LILO_RS11315 (lilo_2176) | - | 2346334..2346930 (-) | 597 | WP_015427214.1 | AAA family ATPase | - |
| LILO_RS11320 (lilo_2177) | - | 2346927..2348045 (-) | 1119 | WP_225513533.1 | ABC transporter permease | - |
| LILO_RS11325 (lilo_2178) | - | 2348350..2348919 (-) | 570 | WP_015427216.1 | hypothetical protein | - |
| LILO_RS11330 (lilo_2179) | - | 2349139..2350023 (-) | 885 | WP_015427217.1 | XRE/MutR family transcriptional regulator | - |
| LILO_RS11335 (lilo_2180) | ruvB | 2350159..2351160 (-) | 1002 | WP_003131994.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| LILO_RS11340 (lilo_2181) | ruvA | 2351287..2351880 (-) | 594 | WP_003131995.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| LILO_RS11345 (lilo_2182) | hexB | 2351993..2353963 (-) | 1971 | WP_042230802.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| LILO_RS11350 (lilo_2183) | - | 2354092..2354787 (-) | 696 | WP_010906384.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21166.73 Da Isoelectric Point: 5.8174
>NTDB_id=46142 LILO_RS11340 WP_003131995.1 2351287..2351880(-) (ruvA) [Lactococcus lactis subsp. lactis IO-1]
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
MFEYLNGKLVKISPTNIVIDVAGIGYLISVANPYAWSALMNTEVKIYVHQVIREDAHSLYGFVNEAEKALFLRLISVSGI
GPKSALAIIAAADNEGLITAIDNSDIKYLTKFPGVGKKTAMQMVLDLAGKFDATGTVGISLLDAGPAGNLALEEAIEALQ
ALGYKATELKKIEKKLAQETGLTSEEYIKSALKLMMK
Nucleotide
Download Length: 594 bp
>NTDB_id=46142 LILO_RS11340 WP_003131995.1 2351287..2351880(-) (ruvA) [Lactococcus lactis subsp. lactis IO-1]
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGCTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCGGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGTG
AAGATGCCCACAGTCTCTATGGTTTTGTTAACGAAGCCGAAAAAGCTTTATTCTTACGTCTGATCAGCGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTACAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
ATGTTTGAATATCTTAATGGAAAATTAGTAAAAATTTCCCCAACAAATATTGTAATTGATGTAGCAGGAATTGGCTATCT
TATCAGTGTAGCTAACCCTTACGCTTGGTCGGCTTTGATGAACACAGAAGTAAAAATTTATGTTCATCAAGTCATTCGTG
AAGATGCCCACAGTCTCTATGGTTTTGTTAACGAAGCCGAAAAAGCTTTATTCTTACGTCTGATCAGCGTTTCTGGGATT
GGGCCAAAATCAGCTCTGGCCATCATTGCGGCGGCTGATAACGAAGGTTTAATCACTGCTATTGACAATAGTGATATCAA
GTATTTAACTAAATTTCCAGGAGTTGGTAAAAAAACAGCCATGCAGATGGTGCTTGATTTGGCTGGGAAATTTGATGCGA
CAGGAACTGTAGGTATTTCTCTTCTTGATGCTGGACCTGCTGGCAATCTTGCTTTGGAAGAAGCGATTGAAGCGCTACAA
GCTTTGGGTTATAAAGCAACAGAATTGAAGAAAATTGAGAAAAAATTAGCTCAAGAAACAGGTCTGACCAGCGAAGAATA
TATCAAATCAGCCTTAAAACTTATGATGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae TIGR4 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae R6 |
60.101 |
100 |
0.604 |
| ruvA | Streptococcus pneumoniae D39 |
60.101 |
100 |
0.604 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
44.828 |
100 |
0.462 |