Detailed information NTG0458704

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: I6J14_RS07890
• Genome accession: NZ_CP068057
• Coordinates: 1565348..1566346 (-)
• Length: 332 a.a.
• NCBI ID: WP_003049085.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1157
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1560348..1571346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J14_RS07875 (I6J14_07875)	-	1562580..1564355 (-)	1776	WP_003049091.1	acyltransferase family protein	-
I6J14_RS07880 (I6J14_07880)	-	1564352..1564753 (-)	402	WP_003049089.1	MORN repeat-containing protein	-
I6J14_RS07885 (I6J14_07885)	-	1564782..1565213 (-)	432	WP_003049087.1	low molecular weight protein-tyrosine-phosphatase	-
I6J14_RS07890 (I6J14_07890)	ruvB	1565348..1566346 (-)	999	WP_003049085.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I6J14_RS07895 (I6J14_07895)	comS	1566397..1566492 (-)	96	WP_198455558.1	quorum-sensing system DWW-type pheromone	Regulator
I6J14_RS07900 (I6J14_07900)	comR	1566579..1567490 (-)	912	WP_003049081.1	XRE family transcriptional regulator	Regulator
I6J14_RS07905 (I6J14_07905)	purB	1567632..1568924 (-)	1293	WP_115252494.1	adenylosuccinate lyase	-
I6J14_RS07910 (I6J14_07910)	purK	1568934..1570019 (-)	1086	WP_115252493.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
I6J14_RS07915 (I6J14_07915)	purE	1570006..1570494 (-)	489	WP_003049074.1	5-(carboxyamino)imidazole ribonucleotide mutase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37344.82 Da
• Isoelectric Point: 4.5951

>NTDB_id=458704 I6J14_RS07890 WP_003049085.1 1565348..1566346(-) (ruvB) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MTRILDNDVMGDEELVERTLRPKYLREYIGQDKVKEQLNIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIIERTANIFDMEIVHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
AQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVVTEK
AYRHLGYPYPSN

Nucleotide

• Length: 999 bp

>NTDB_id=458704 I6J14_RS07890 WP_003049085.1 1565348..1566346(-) (ruvB) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGACTAGAATTTTAGATAATGATGTAATGGGGGATGAAGAGCTTGTTGAGCGAACGCTTCGTCCGAAGTATTTGCGTGA
GTACATTGGGCAAGATAAGGTTAAGGAGCAATTAAACATTTTTATTGAAGCGGCTAAGCTTCGTGATGAATCTTTAGATC
ATGTGTTGTTGTTTGGCCCTCCAGGTTTAGGGAAAACCACAATGGCATTTGTGATTGCTAATGAATTAGGGGTTAATCTG
AAACAAACATCTGGTCCGGCAATCGAGAAGGCTGGTGATTTGGTAGCTATTTTGAATGATCTGGAACCAGGAGATGTGCT
CTTTATTGATGAAATTCATCGTCTGCCTATGGCAGTCGAAGAAGTATTGTACAGTGCTATGGAAGATTTTTACATCGATA
TCATGATTGGTGCTGGGGACACTAGTCGAAGTGTTCATTTGGATTTACCACCTTTTACATTGATTGGAGCTACAACACGA
GCTGGGATGTTGTCAAATCCTTTGCGAGCTCGATTTGGCATTACTGGACACATGGAATACTATCAGGAAGCTGATTTGAC
TGAAATTATCGAACGAACAGCTAATATTTTTGACATGGAAATTGTTCATGAAGCGGCTCAAGAGTTAGCTTGCCGTAGTC
GGGGAACACCGCGTATTGCTAATAGATTGTTAAAGCGGGTACGTGATTATGCTCAGATTGTTGGAGATGGCGTCATCACG
GCTCAGATTACAGACAAAGCCCTAACCATGCTTGATGTTGACCGAGAAGGTCTTGATTATGTAGATCAGAAGATTTTACG
AACCATGATTGAAATGTATCAGGGTGGACCGGTTGGGTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACAG
TTGAAGACATGTACGAACCTTATCTGATTCAAAAAGGATTTCTAATGCGTACACGAACTGGTCGTGTGGTGACGGAAAAA
GCCTATCGTCATCTTGGTTATCCATATCCGTCTAACTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	89.058	99.096	0.883
ruvB	Streptococcus pneumoniae R6	88.754	99.096	0.88
ruvB	Streptococcus pneumoniae D39	88.754	99.096	0.88
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.451	98.795	0.587
ruvB	Helicobacter pylori 26695	50.613	98.193	0.497
ruvB	Synechocystis sp. PCC 6803	49.686	95.783	0.476