Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   I6J15_RS00655 Genome accession   NZ_CP068056
Coordinates   138322..138972 (+) Length   216 a.a.
NCBI ID   WP_020916359.1    Uniprot ID   A0AB33AKJ9
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 133322..143972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS00630 (I6J15_00630) - 134921..135736 (-) 816 WP_228380506.1 hypothetical protein -
  I6J15_RS00635 (I6J15_00635) - 135967..136347 (-) 381 WP_020916363.1 rhodanese-like domain-containing protein -
  I6J15_RS00640 (I6J15_00640) - 136358..137326 (-) 969 WP_111712661.1 ROK family glucokinase -
  I6J15_RS00645 (I6J15_00645) - 137319..137528 (-) 210 WP_006531568.1 YqgQ family protein -
  I6J15_RS00650 (I6J15_00650) - 137659..138183 (-) 525 WP_020916360.1 Dps family protein -
  I6J15_RS00655 (I6J15_00655) cclA/cilC 138322..138972 (+) 651 WP_020916359.1 prepilin peptidase Machinery gene
  I6J15_RS00660 (I6J15_00660) - 139060..140406 (+) 1347 WP_111712660.1 Nramp family divalent metal transporter -
  I6J15_RS00665 (I6J15_00665) trpA 140442..141225 (-) 784 Protein_135 tryptophan synthase subunit alpha -
  I6J15_RS00670 (I6J15_00670) trpB 141229..142362 (-) 1134 Protein_136 tryptophan synthase subunit beta -
  I6J15_RS00675 (I6J15_00675) - 142436..143017 (-) 582 WP_058833199.1 phosphoribosylanthranilate isomerase -
  I6J15_RS00680 (I6J15_00680) trpC 143004..143744 (-) 741 WP_058833333.1 indole-3-glycerol phosphate synthase TrpC -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 24600.50 Da        Isoelectric Point: 5.5569

>NTDB_id=458538 I6J15_RS00655 WP_020916359.1 138322..138972(+) (cclA/cilC) [Streptococcus lutetiensis strain FDAARGOS_1158]
MDTFLFFFLGASLASFIGLVVDRFLEESILFPASHCNTCGKQLRPLDMIPVLSQIFNHSRCHFCKSKIPLWYGIFEFVCG
LATALYYHDIIAPSSLFIFFFSMTLSLYDLKNQSFPLLIWLLPSASLLLFLPLNTVSIILLLLGIIAELFDIKIGSGDFF
YLASLSLFLDLESILWIVELGSLVGILYCLFDKNKRIPFIPFLFLGYLLVIIFKCD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=458538 I6J15_RS00655 WP_020916359.1 138322..138972(+) (cclA/cilC) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGGACACTTTTTTATTCTTTTTTCTTGGAGCATCGCTTGCTTCATTTATCGGATTAGTTGTTGATCGTTTTCTAGAGGA
ATCTATTTTATTTCCTGCTAGTCATTGTAATACCTGTGGTAAACAACTGAGACCGCTAGACATGATTCCAGTTCTTTCTC
AGATTTTTAATCATTCTCGCTGCCATTTTTGCAAAAGTAAAATACCTTTATGGTATGGCATTTTTGAATTTGTCTGTGGG
CTCGCAACTGCTCTTTATTACCACGATATCATAGCACCATCTAGTCTCTTTATTTTCTTCTTTAGCATGACACTTAGTTT
ATATGATTTAAAAAACCAGTCCTTTCCTCTATTAATCTGGTTACTACCCAGTGCTTCTTTACTCCTTTTTCTTCCTCTTA
ATACGGTAAGTATTATTCTTCTTTTACTTGGGATCATAGCTGAGCTTTTTGACATAAAAATCGGTAGCGGTGATTTTTTC
TACCTAGCCAGTTTGAGTCTTTTTCTTGATTTGGAGAGCATTTTATGGATTGTTGAACTGGGTTCTTTGGTAGGAATTCT
GTATTGCCTTTTTGATAAAAACAAACGCATTCCCTTTATTCCTTTTCTATTTTTAGGCTATCTTTTAGTTATAATTTTTA
AGTGTGATTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AKJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus pneumoniae TIGR4

43.256

99.537

0.431
  cclA/cilC Streptococcus pneumoniae Rx1

42.791

99.537

0.426
  cclA/cilC Streptococcus pneumoniae D39

42.791

99.537

0.426
  cclA/cilC Streptococcus pneumoniae R6

42.791

99.537

0.426
  cclA/cilC Streptococcus mitis SK321

42.857

97.222

0.417
  cclA/cilC Streptococcus mitis NCTC 12261

41.86

99.537

0.417