Detailed information NTG0045817

Bioinformatically predicted

Overview

• Name: pilO
• Type: Machinery gene
• Locus tag: TCCBUS3UF1_RS03085
• Genome accession: NC_017278
• Coordinates: 619971..620570 (-)
• Length: 199 a.a.
• NCBI ID: WP_014515042.1
• Uniprot ID: -
• Organism: Thermus sp. CCB_US3_UF1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 614971..625570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TCCBUS3UF1_RS03070 (TCCBUS3UF1_6310)	aroC	615513..616664 (-)	1152	WP_014515039.1	chorismate synthase	-
TCCBUS3UF1_RS03075 (TCCBUS3UF1_6320)	pilQ	616740..618998 (-)	2259	WP_041433717.1	secretin N-terminal domain-containing protein	Machinery gene
TCCBUS3UF1_RS12010	-	619010..619591 (-)	582	WP_231291413.1	hypothetical protein	-
TCCBUS3UF1_RS03085 (TCCBUS3UF1_6340)	pilO	619971..620570 (-)	600	WP_014515042.1	type 4a pilus biogenesis protein PilO	Machinery gene
TCCBUS3UF1_RS03090 (TCCBUS3UF1_6350)	pilN	620560..621183 (-)	624	WP_014515043.1	competence protein	Machinery gene
TCCBUS3UF1_RS03095 (TCCBUS3UF1_6360)	pilM	621176..622309 (-)	1134	WP_014515044.1	type IV pilus assembly protein PilM	Machinery gene
TCCBUS3UF1_RS03100 (TCCBUS3UF1_6370)	-	622472..623476 (-)	1005	WP_014515045.1	homoisocitrate dehydrogenase	-
TCCBUS3UF1_RS03105 (TCCBUS3UF1_6380)	-	623545..624039 (-)	495	WP_014515046.1	DUF5317 domain-containing protein	-
TCCBUS3UF1_RS03110 (TCCBUS3UF1_6390)	-	624090..625520 (-)	1431	WP_014515047.1	HD-GYP domain-containing protein	-

Sequence

Protein

• Length: 199 a.a.
• Molecular weight: 21947.32 Da
• Isoelectric Point: 8.4581

>NTDB_id=45817 TCCBUS3UF1_RS03085 WP_014515042.1 619971..620570(-) (pilO) [Thermus sp. CCB_US3_UF1]
MLAKLGQREWALISIALTLAVALLWYFLLIVPLRQETELVRQEIATLIPERDRGRQAQRALPELRAAIAALQAERQAFLR
ALPREERLAQVLSEILGEAARSGVSVRSFTRSPTSAPVPEVRAVNLALSLEAPFPETYAYLRRLEGLSRFSSLSGLNLSV
QGQDLNPLLSTSLTLTLYMLAKDLEAQTEGGQQGQGGER

Nucleotide

• Length: 600 bp

>NTDB_id=45817 TCCBUS3UF1_RS03085 WP_014515042.1 619971..620570(-) (pilO) [Thermus sp. CCB_US3_UF1]
GTGCTCGCTAAGCTGGGACAGCGGGAATGGGCCCTGATCTCCATTGCCCTCACCCTGGCGGTGGCCCTCCTGTGGTACTT
CCTCCTCATCGTGCCCTTACGGCAGGAAACCGAGCTGGTGCGGCAGGAGATCGCCACCTTGATCCCCGAAAGGGACCGGG
GCCGCCAGGCCCAGCGGGCCCTGCCCGAACTCCGCGCCGCCATCGCAGCGCTCCAGGCCGAGCGCCAGGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAGCGCCTGGCCCAGGTCCTCTCGGAAATCCTGGGCGAGGCCGCCCGGAGCGGGGTCAGCGTGCG
CTCCTTTACCCGCTCCCCCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTCAACCTGGCCCTTTCCCTCGAGGCCCCCT
TCCCCGAAACCTACGCCTACCTGAGGCGGCTGGAGGGGCTTTCCCGCTTCAGCTCCCTTTCGGGCTTGAACCTGAGCGTC
CAGGGCCAGGACCTCAACCCCCTCCTCTCCACCAGCCTGACCCTGACCCTCTACATGTTGGCCAAGGACCTCGAGGCCCA
AACCGAGGGAGGCCAGCAAGGCCAAGGAGGTGAACGGTGA

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilO (PilO) (46-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilO	Thermus thermophilus HB27	74.869	95.98	0.719