Detailed information NTG0045816

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: TCCBUS3UF1_RS03075
• Genome accession: NC_017278
• Coordinates: 616740..618998 (-)
• Length: 752 a.a.
• NCBI ID: WP_041433717.1
• Uniprot ID: -
• Organism: Thermus sp. CCB_US3_UF1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 611740..623998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TCCBUS3UF1_RS03045 (TCCBUS3UF1_6260)	-	611754..612119 (+)	366	WP_041433715.1	DUF4870 domain-containing protein	-
TCCBUS3UF1_RS03050 (TCCBUS3UF1_6270)	-	612097..612474 (-)	378	WP_014515035.1	4'-phosphopantetheinyl transferase superfamily protein	-
TCCBUS3UF1_RS03055 (TCCBUS3UF1_6280)	rsmF	612549..613916 (+)	1368	WP_014515036.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
TCCBUS3UF1_RS03060 (TCCBUS3UF1_6290)	-	613913..614965 (-)	1053	WP_014515037.1	3-dehydroquinate synthase family protein	-
TCCBUS3UF1_RS03065 (TCCBUS3UF1_6300)	-	614943..615497 (-)	555	WP_014515038.1	shikimate kinase	-
TCCBUS3UF1_RS03070 (TCCBUS3UF1_6310)	aroC	615513..616664 (-)	1152	WP_014515039.1	chorismate synthase	-
TCCBUS3UF1_RS03075 (TCCBUS3UF1_6320)	pilQ	616740..618998 (-)	2259	WP_041433717.1	secretin N-terminal domain-containing protein	Machinery gene
TCCBUS3UF1_RS12010	-	619010..619591 (-)	582	WP_231291413.1	hypothetical protein	-
TCCBUS3UF1_RS03085 (TCCBUS3UF1_6340)	pilO	619971..620570 (-)	600	WP_014515042.1	type 4a pilus biogenesis protein PilO	Machinery gene
TCCBUS3UF1_RS03090 (TCCBUS3UF1_6350)	pilN	620560..621183 (-)	624	WP_014515043.1	competence protein	Machinery gene
TCCBUS3UF1_RS03095 (TCCBUS3UF1_6360)	pilM	621176..622309 (-)	1134	WP_014515044.1	type IV pilus assembly protein PilM	Machinery gene
TCCBUS3UF1_RS03100 (TCCBUS3UF1_6370)	-	622472..623476 (-)	1005	WP_014515045.1	homoisocitrate dehydrogenase	-

Sequence

Protein

• Length: 752 a.a.
• Molecular weight: 81645.66 Da
• Isoelectric Point: 5.7571

>NTDB_id=45816 TCCBUS3UF1_RS03075 WP_041433717.1 616740..618998(-) (pilQ) [Thermus sp. CCB_US3_UF1]
MKPLTWALVALGLSALAGSLPQDPRFEAKVNLKVSESQVRAGLTLPLDVVLEALARSVGLQPFIYRAYDASGDPAKALPP
LPNVKVDFQGKAFREAWDLLFATYGTQFNLDYLFLPPDVVVVAPTQVITALVDAPSRAGAAERRPYVVGIPEAAYRQAVQ
GQGGQVQVTSSVEAAKGWVQNDLLPFLSREAAGLSVNWIVVEEGGRLKAILSVLATPEQHARFSDILQRAGIDFRPLPAL
SLPRPRVERAYTLSHATFPELLSFLQAQVPGAQVSVLPTDPKRAIVLATEEDHARLKGLLEAADLPKPVATVRRVYALQN
LTYAEVEARLRPLLSRELPKARLESVPGNPKALLLEATEAEQALFAEILKAADVAPQAAPPPQEATTRRLYPLRFADAEK
VAPFLAREVPGIVVQTVPGQSVLSVRGTERQLAEVENLLAQIDRAPEQGPPVFQRAYQLSNAKAADLAKVLQEALQARQG
QAQGQAQAQPQRQATVVADERTNTLIVTGTQEDLALVEGLIPKLDQAVPQVNLRVRIQEVQANLTQNLGLKWNTVAGGNV
VASILDSGLSLIFDSTRSLAALNILATLEALQRQGLSRALRDVNQTVLNNQTARLQSGETFLIRRIVGDRVERVPFDIGI
IVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTMRVRDGQTVVLGGLTSQESNQVQQGVPLLMDIPL
IGELFKQRTQENTDRELLVVITADILKETASR

Nucleotide

• Length: 2259 bp

>NTDB_id=45816 TCCBUS3UF1_RS03075 WP_041433717.1 616740..618998(-) (pilQ) [Thermus sp. CCB_US3_UF1]
ATGAAACCCCTAACCTGGGCCCTGGTGGCCCTGGGCCTTTCCGCCCTGGCGGGAAGCCTCCCCCAGGACCCCCGGTTTGA
AGCCAAGGTGAACCTGAAGGTTTCCGAAAGCCAGGTGCGGGCTGGCCTCACCCTGCCCCTGGACGTGGTGTTGGAGGCCC
TGGCGCGGAGCGTGGGCCTGCAGCCCTTCATCTACCGGGCCTACGACGCCTCCGGGGACCCGGCCAAGGCCCTGCCCCCC
CTGCCCAACGTGAAGGTGGACTTCCAAGGGAAGGCCTTCCGGGAAGCCTGGGACCTCCTCTTCGCCACCTACGGCACCCA
GTTCAACCTGGACTACCTCTTCCTGCCCCCGGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCACCGCCTTGGTGGACG
CCCCAAGCCGGGCCGGGGCGGCGGAGCGCAGGCCCTACGTGGTGGGCATCCCCGAGGCGGCCTACCGCCAGGCGGTGCAG
GGCCAAGGGGGGCAGGTCCAGGTCACCTCCAGCGTGGAGGCCGCCAAGGGTTGGGTGCAAAACGACCTCCTGCCCTTCCT
CTCCCGGGAAGCCGCCGGGCTTAGCGTGAACTGGATCGTGGTGGAGGAAGGGGGCCGGCTCAAGGCCATCCTTTCCGTTC
TGGCCACCCCGGAACAGCACGCCCGCTTCTCCGACATCCTGCAGCGGGCGGGGATCGATTTCCGCCCCCTTCCCGCCCTA
AGCCTGCCCAGGCCGCGGGTGGAGCGCGCCTACACCCTCAGCCACGCCACCTTCCCCGAGCTCCTCTCCTTCCTCCAGGC
CCAGGTGCCCGGGGCCCAGGTGAGCGTCCTCCCCACCGACCCCAAACGGGCCATCGTCCTGGCCACCGAGGAGGACCATG
CCCGCCTAAAGGGGCTCCTCGAGGCCGCCGACCTGCCCAAGCCCGTGGCCACCGTGCGCCGGGTCTACGCCTTGCAGAAC
CTCACCTACGCCGAGGTGGAGGCCCGCCTTCGGCCCCTCCTGAGCCGGGAACTGCCCAAGGCCCGCCTGGAAAGCGTCCC
CGGCAACCCCAAAGCCCTCCTCCTGGAGGCCACTGAGGCCGAACAGGCCCTCTTCGCCGAGATCCTGAAGGCGGCCGACG
TGGCCCCTCAAGCGGCTCCCCCGCCCCAGGAGGCCACCACCCGCAGGCTTTACCCCCTGCGCTTCGCCGACGCGGAGAAG
GTGGCCCCCTTCCTGGCCCGGGAGGTACCGGGGATCGTGGTGCAGACCGTGCCCGGCCAGTCCGTCCTTTCCGTGCGGGG
CACAGAAAGGCAGCTGGCCGAGGTGGAAAACCTCCTGGCCCAGATCGACCGGGCCCCGGAACAAGGCCCCCCGGTCTTCC
AGCGGGCCTACCAGCTCTCCAACGCCAAGGCCGCCGACCTGGCCAAGGTGCTCCAGGAGGCCCTCCAGGCCCGTCAAGGC
CAGGCCCAAGGCCAAGCCCAGGCCCAGCCCCAGCGCCAAGCCACGGTGGTGGCGGATGAGCGCACCAACACCCTGATCGT
CACGGGTACGCAGGAGGACCTGGCCCTGGTGGAGGGGCTGATCCCCAAGCTGGACCAGGCAGTGCCCCAGGTAAACCTCC
GGGTACGCATCCAAGAGGTCCAGGCCAACCTGACCCAGAACCTGGGCCTGAAGTGGAACACGGTGGCCGGGGGCAACGTG
GTGGCCAGCATCCTGGACTCCGGGCTTTCCCTGATCTTTGACAGCACCCGCAGCCTGGCGGCCCTGAACATCCTGGCCAC
CCTCGAGGCCCTCCAGCGCCAGGGGCTTTCCCGGGCCCTTAGGGACGTGAACCAGACCGTCCTCAACAACCAGACCGCCC
GCCTCCAGTCCGGGGAAACCTTCCTCATCCGCCGCATCGTGGGGGACCGGGTGGAGCGGGTACCCTTTGACATCGGCATC
ATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGGCAGATCCTCCTCAACATCAAGGCCGAGGTTTCCGGCAACGTCCA
GCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCATGCGGGTGCGGGACGGCCAGA
CCGTGGTCCTTGGCGGCCTCACCTCCCAGGAGAGCAACCAGGTCCAGCAAGGGGTGCCCCTCCTCATGGATATCCCCTTG
ATCGGGGAACTCTTCAAGCAGCGCACCCAGGAAAACACCGACCGGGAGCTTCTGGTGGTCATCACCGCCGATATCCTGAA
GGAAACCGCTTCCCGCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (590-747)

• Bacterial type II/III secretion system short domain (Secretin_N) (389-448)

• Bacterial type II/III secretion system short domain (Secretin_N) (455-530)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	81.367	99.202	0.807