Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C663_RS14575 Genome accession   NC_020244
Coordinates   2924988..2925683 (-) Length   231 a.a.
NCBI ID   WP_015483587.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2919988..2930683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS14555 yttA 2920415..2921161 (+) 747 Protein_2953 LMBR1 domain-containing protein -
  C663_RS14560 (C663_2884) bceB 2921198..2923138 (-) 1941 WP_015384426.1 bacitracin ABC transporter permease BceB -
  C663_RS14565 (C663_2885) bceA 2923128..2923889 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C663_RS14570 (C663_2886) bceS 2923991..2924995 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  C663_RS14575 (C663_2887) braR 2924988..2925683 (-) 696 WP_015483587.1 two-component response regulator BceR Regulator
  C663_RS14580 (C663_2888) ytrF 2925780..2927090 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  C663_RS14585 (C663_2889) ytrE 2927080..2927775 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  C663_RS14590 (C663_2890) ytrD 2927790..2928767 (-) 978 WP_015483588.1 ABC transporter permease YtrD -
  C663_RS14595 (C663_2891) ytrC 2928797..2929783 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  C663_RS14600 (C663_2892) ytrB 2929777..2930655 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=45818 C663_RS14575 WP_015483587.1 2924988..2925683(-) (braR) [Bacillus subtilis XF-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=45818 C663_RS14575 WP_015483587.1 2924988..2925683(-) (braR) [Bacillus subtilis XF-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAATCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment