Detailed information NTG0045807

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: C663_RS13245
• Genome accession: NC_020244
• Coordinates: 2647641..2648246 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis XF-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2642641..2653246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS13215 (C663_2609)	-	2643454..2643843 (+)	390	WP_015483510.1	TIGR04086 family membrane protein	-
C663_RS13220 (C663_2610)	yajC	2643900..2644166 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
C663_RS13225 (C663_2611)	tgt	2644203..2645348 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
C663_RS13230 (C663_2612)	queA	2645375..2646403 (-)	1029	WP_015384251.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
C663_RS13235 (C663_2613)	yrzS	2646433..2646633 (-)	201	WP_015384252.1	DUF2905 domain-containing protein	-
C663_RS13240 (C663_2614)	ruvB	2646626..2647630 (-)	1005	WP_015384253.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
C663_RS13245 (C663_2615)	ruvA	2647641..2648246 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
C663_RS13250 (C663_2616)	bofC	2648385..2648897 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
C663_RS13255 (C663_2617)	csbX	2648945..2650252 (-)	1308	WP_015483512.1	MFS transporter	-
C663_RS13260 (C663_2618)	iolG	2650323..2651348 (-)	1026	WP_015483513.1	inositol 2-dehydrogenase	-
C663_RS13265 (C663_2619)	yrzF	2651586..2652233 (+)	648	WP_015483514.1	phosphotransferase	-
C663_RS21385	-	2652279..2652401 (-)	123	WP_003229707.1	hypothetical protein	-
C663_RS21390 (C663_2620)	-	2652606..2652932 (+)	327	WP_175950709.1	DUF5412 family protein	-
C663_RS20920 (C663_2621)	-	2652939..2653079 (+)	141	WP_015483515.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=45807 C663_RS13245 WP_003229717.1 2647641..2648246(-) (ruvA) [Bacillus subtilis XF-1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=45807 C663_RS13245 WP_003229717.1 2647641..2648246(-) (ruvA) [Bacillus subtilis XF-1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408