Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BUAMB_RS02595 | Genome accession | NC_017259 |
| Coordinates | 557412..557927 (-) | Length | 171 a.a. |
| NCBI ID | WP_014500215.1 | Uniprot ID | G2LQ26 |
| Organism | Buchnera aphidicola str. Ua (Uroleucon ambrosiae) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 552412..562927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BUAMB_RS02575 (BUAMB_516) | - | 552855..554078 (-) | 1224 | WP_014500211.1 | phosphopentomutase | - |
| BUAMB_RS02580 (BUAMB_517) | - | 554139..555731 (-) | 1593 | WP_014500212.1 | peptide chain release factor 3 | - |
| BUAMB_RS02585 (BUAMB_518) | - | 555889..556467 (-) | 579 | WP_014500213.1 | NfuA family Fe-S biogenesis protein | - |
| BUAMB_RS02590 (BUAMB_519) | bioH | 556576..557349 (+) | 774 | WP_014500214.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| BUAMB_RS02595 (BUAMB_520) | ssb | 557412..557927 (-) | 516 | WP_014500215.1 | single-stranded DNA-binding protein | Machinery gene |
| BUAMB_RS02600 (BUAMB_521) | dnaB | 558400..559797 (+) | 1398 | WP_014500216.1 | replicative DNA helicase | - |
| BUAMB_RS02605 (BUAMB_522) | gshB | 560046..561008 (+) | 963 | WP_014500217.1 | glutathione synthase | - |
| BUAMB_RS02610 (BUAMB_523) | ruvX | 561019..561438 (+) | 420 | WP_014500218.1 | Holliday junction resolvase RuvX | - |
| BUAMB_RS02615 (BUAMB_524) | hemW | 561748..562878 (+) | 1131 | WP_014500219.1 | radical SAM family heme chaperone HemW | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19498.86 Da Isoelectric Point: 6.2318
>NTDB_id=45704 BUAMB_RS02595 WP_014500215.1 557412..557927(-) (ssb) [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
MASRGINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGEHKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGIERYTTEIIVNIGGTMQMLGSRNTNLQTLSTHENNNIEEQIKKTDQVDFKKNIVSHNSNKDLVHTS
SEIDFDDEIPF
MASRGINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGEHKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGIERYTTEIIVNIGGTMQMLGSRNTNLQTLSTHENNNIEEQIKKTDQVDFKKNIVSHNSNKDLVHTS
SEIDFDDEIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=45704 BUAMB_RS02595 WP_014500215.1 557412..557927(-) (ssb) [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
ATGGCTAGTAGAGGTATAAATAAAGTTATTTTAATTGGACATTTAGGCCAAGACCCTGAAGTTCGTTATATGCCAAATGG
TAATGCAGTAGTAAATATGACATTAGCTACTTCAGAAAATTGGAAAGATAAAAATACGGGAGAACATAAAGAGAAAACAG
AATGGCATCGAATAGTATTATTTGGAAAATTAGCAGAAATTGCAGGTGAATATCTTCGAAAAGGCTCTCAAGTATATATT
GAGGGAGCATTACAAACTAGAAAATGGCAAGATCAAAATGGCATTGAACGTTATACTACAGAAATTATTGTAAATATTGG
TGGTACTATGCAAATGTTAGGTAGTCGAAATACTAATTTACAAACTTTATCAACTCATGAAAATAACAATATTGAAGAAC
AAATTAAAAAAACAGATCAAGTAGATTTTAAAAAAAATATAGTATCACATAACTCAAATAAAGATTTGGTTCACACGTCT
TCAGAAATAGATTTTGATGATGAAATTCCTTTTTAA
ATGGCTAGTAGAGGTATAAATAAAGTTATTTTAATTGGACATTTAGGCCAAGACCCTGAAGTTCGTTATATGCCAAATGG
TAATGCAGTAGTAAATATGACATTAGCTACTTCAGAAAATTGGAAAGATAAAAATACGGGAGAACATAAAGAGAAAACAG
AATGGCATCGAATAGTATTATTTGGAAAATTAGCAGAAATTGCAGGTGAATATCTTCGAAAAGGCTCTCAAGTATATATT
GAGGGAGCATTACAAACTAGAAAATGGCAAGATCAAAATGGCATTGAACGTTATACTACAGAAATTATTGTAAATATTGG
TGGTACTATGCAAATGTTAGGTAGTCGAAATACTAATTTACAAACTTTATCAACTCATGAAAATAACAATATTGAAGAAC
AAATTAAAAAAACAGATCAAGTAGATTTTAAAAAAAATATAGTATCACATAACTCAAATAAAGATTTGGTTCACACGTCT
TCAGAAATAGATTTTGATGATGAAATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
55.618 |
100 |
0.579 |
| ssb | Glaesserella parasuis strain SC1401 |
46.154 |
100 |
0.491 |
| ssb | Neisseria meningitidis MC58 |
43.182 |
100 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.444 |