Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CWO_RS02750 | Genome accession | NC_017255 |
| Coordinates | 582038..582553 (-) | Length | 171 a.a. |
| NCBI ID | WP_009874495.1 | Uniprot ID | P57610 |
| Organism | Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 577038..587553
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWO_RS02740 (CWO_02855) | - | 577986..579566 (-) | 1581 | WP_014498784.1 | peptide chain release factor 3 | - |
| CWO_RS02745 (CWO_02860) | - | 580678..581256 (-) | 579 | WP_014499171.1 | NfuA family Fe-S biogenesis protein | - |
| CWO_RS02750 (CWO_02865) | ssb | 582038..582553 (-) | 516 | WP_009874495.1 | single-stranded DNA-binding protein | Machinery gene |
| CWO_RS02755 (CWO_02870) | dnaB | 583224..584621 (+) | 1398 | WP_009874496.1 | replicative DNA helicase | - |
| CWO_RS02760 (CWO_02875) | gshB | 584868..585830 (+) | 963 | WP_012619578.1 | glutathione synthase | - |
| CWO_RS02765 (CWO_02880) | ruvX | 585841..586248 (+) | 408 | WP_010896159.1 | Holliday junction resolvase RuvX | - |
| CWO_RS02770 (CWO_02885) | - | 586366..586968 (+) | 603 | WP_009874499.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19355.77 Da Isoelectric Point: 6.1147
>NTDB_id=45689 CWO_RS02750 WP_009874495.1 582038..582553(-) (ssb) [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=45689 CWO_RS02750 WP_009874495.1 582038..582553(-) (ssb) [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.497 |
100 |
0.585 |
| ssb | Glaesserella parasuis strain SC1401 |
47.514 |
100 |
0.503 |
| ssb | Neisseria meningitidis MC58 |
43.182 |
100 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.444 |