Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | I33_RS11920 | Genome accession | NC_017195 |
| Coordinates | 2406341..2406637 (-) | Length | 98 a.a. |
| NCBI ID | WP_014477332.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis str. RO-NN-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2401341..2411637
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I33_RS11875 (I33_2542) | tasA | 2401745..2402530 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| I33_RS11880 (I33_2543) | sipW | 2402595..2403167 (-) | 573 | WP_014477325.1 | signal peptidase I SipW | - |
| I33_RS11885 (I33_2544) | tapA | 2403151..2403912 (-) | 762 | WP_014477326.1 | amyloid fiber anchoring/assembly protein TapA | - |
| I33_RS11890 (I33_2545) | yqzG | 2404186..2404512 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| I33_RS11895 (I33_2546) | spoIITA | 2404554..2404733 (-) | 180 | WP_014477327.1 | YqzE family protein | - |
| I33_RS11900 (I33_2547) | comGG | 2404805..2405179 (-) | 375 | WP_014477328.1 | ComG operon protein ComGG | Machinery gene |
| I33_RS11905 (I33_2548) | comGF | 2405180..2405563 (-) | 384 | WP_041519396.1 | ComG operon protein ComGF | Machinery gene |
| I33_RS11910 (I33_2549) | comGE | 2405589..2405936 (-) | 348 | WP_014477330.1 | ComG operon protein 5 | Machinery gene |
| I33_RS11915 (I33_2550) | comGD | 2405920..2406351 (-) | 432 | WP_014477331.1 | comG operon protein ComGD | Machinery gene |
| I33_RS11920 (I33_2551) | comGC | 2406341..2406637 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| I33_RS11925 (I33_2552) | comGB | 2406651..2407688 (-) | 1038 | WP_014477333.1 | comG operon protein ComGB | Machinery gene |
| I33_RS11930 (I33_2553) | comGA | 2407675..2408745 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| I33_RS11935 (I33_2555) | corA | 2409156..2410109 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| I33_RS11940 (I33_2556) | yqhB | 2410252..2411580 (+) | 1329 | WP_014477335.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10830.69 Da Isoelectric Point: 6.4730
>NTDB_id=45419 I33_RS11920 WP_014477332.1 2406341..2406637(-) (comGC) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=45419 I33_RS11920 WP_014477332.1 2406341..2406637(-) (comGC) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |