Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | A7A1_RS07105 | Genome accession | NC_019896 |
| Coordinates | 1390827..1391831 (+) | Length | 334 a.a. |
| NCBI ID | WP_003229718.1 | Uniprot ID | O32055 |
| Organism | Bacillus subtilis subsp. subtilis str. BSP1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1385827..1396831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A1_RS21915 | - | 1385894..1385968 (-) | 75 | Protein_1386 | hypothetical protein | - |
| A7A1_RS21515 | - | 1386053..1386175 (+) | 123 | WP_003229707.1 | hypothetical protein | - |
| A7A1_RS07080 (A7A1_0420) | yrzF | 1386221..1386868 (-) | 648 | WP_015251558.1 | phosphotransferase | - |
| A7A1_RS07085 (A7A1_0419) | iolG | 1387106..1388134 (+) | 1029 | WP_015251559.1 | inositol 2-dehydrogenase | - |
| A7A1_RS07090 (A7A1_0418) | csbX | 1388205..1389512 (+) | 1308 | WP_003246197.1 | MFS transporter | - |
| A7A1_RS07095 (A7A1_0417) | bofC | 1389560..1390072 (+) | 513 | WP_003229715.1 | sporulation cell-cell signaling protein BofC | - |
| A7A1_RS07100 (A7A1_0416) | ruvA | 1390211..1390816 (+) | 606 | WP_003229717.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| A7A1_RS07105 (A7A1_0415) | ruvB | 1390827..1391831 (+) | 1005 | WP_003229718.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| A7A1_RS07110 | yrzS | 1391824..1392024 (+) | 201 | WP_003222669.1 | DUF2905 domain-containing protein | - |
| A7A1_RS07115 (A7A1_0414) | queA | 1392054..1393082 (+) | 1029 | WP_003229723.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| A7A1_RS07120 (A7A1_0413) | tgt | 1393109..1394254 (+) | 1146 | WP_003229725.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| A7A1_RS07125 (A7A1_0412) | yajC | 1394291..1394557 (+) | 267 | WP_004398708.1 | preprotein translocase subunit YajC | - |
| A7A1_RS07130 (A7A1_0411) | - | 1394614..1395003 (-) | 390 | WP_004398667.1 | TIGR04086 family membrane protein | - |
| A7A1_RS07135 (A7A1_0410) | yrbG | 1395201..1395857 (+) | 657 | WP_015251561.1 | DUF421 domain-containing protein | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37467.78 Da Isoelectric Point: 5.1631
>NTDB_id=45390 A7A1_RS07105 WP_003229718.1 1390827..1391831(+) (ruvB) [Bacillus subtilis subsp. subtilis str. BSP1]
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
Nucleotide
Download Length: 1005 bp
>NTDB_id=45390 A7A1_RS07105 WP_003229718.1 1390827..1391831(+) (ruvB) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ruvB | Streptococcus pneumoniae TIGR4 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae R6 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae D39 |
60.429 |
97.605 |
0.59 |
| ruvB | Synechocystis sp. PCC 6803 |
57.143 |
98.503 |
0.563 |
| ruvB | Helicobacter pylori 26695 |
52.744 |
98.204 |
0.518 |